Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 AC023794.5-201ENST00000564380 2157 ntBASIC14.43□□□□□ -0.1
SFT2D3Q587I9 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
SFT2D3Q587I9 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AC068760.1-201ENST00000493579 1953 ntBASIC14.42□□□□□ -0.1
SFT2D3Q587I9 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 IGHV3-71-201ENST00000523324 359 ntBASIC14.42□□□□□ -0.1
SFT2D3Q587I9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AC018665.1-201ENST00000622927 1362 ntBASIC14.42□□□□□ -0.1
SFT2D3Q587I9 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SFT2D3Q587I9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 AC079776.1-201ENST00000401540 1152 ntBASIC14.41□□□□□ -0.1
SFT2D3Q587I9 BAATP1-201ENST00000412284 1225 ntBASIC14.41□□□□□ -0.1
SFT2D3Q587I9 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.41□□□□□ -0.1
SFT2D3Q587I9 ARSEP1-201ENST00000420443 635 ntBASIC14.41□□□□□ -0.1
SFT2D3Q587I9 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 RPL28-204ENST00000431533 590 ntTSL 2 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 KRT43P-201ENST00000434019 910 ntBASIC14.41□□□□□ -0.1
SFT2D3Q587I9 AC234783.1-201ENST00000441761 496 ntBASIC14.41□□□□□ -0.1
SFT2D3Q587I9 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.41□□□□□ -0.1
SFT2D3Q587I9 ACA64.2-201ENST00000459014 129 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms