Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 AC074338.1-201ENST00000416825 156 ntBASIC10.85□□□□□ -0.67
CKS2P33552 AC015922.1-201ENST00000421102 1152 ntBASIC10.85□□□□□ -0.67
CKS2P33552 KRT18P64-201ENST00000434946 1219 ntBASIC10.85□□□□□ -0.67
CKS2P33552 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC10.85□□□□□ -0.67
CKS2P33552 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 RNF146-204ENST00000476956 884 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC10.85□□□□□ -0.67
CKS2P33552 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
CKS2P33552 AC243562.1-201ENST00000560672 389 ntBASIC10.85□□□□□ -0.67
CKS2P33552 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.85□□□□□ -0.67
CKS2P33552 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.85□□□□□ -0.67
CKS2P33552 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
CKS2P33552 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.85□□□□□ -0.67
CKS2P33552 VPS51-217ENST00000639871 243 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
CKS2P33552 TP73-209ENST00000603362 1668 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 BEND3P3-201ENST00000611030 2440 ntBASIC10.85□□□□□ -0.67
CKS2P33552 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
CKS2P33552 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC10.85□□□□□ -0.67
CKS2P33552 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
CKS2P33552 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 BIVM-ERCC5-205ENST00000639435 5632 ntAPPRIS P5 TSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 MAN2B2-201ENST00000285599 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 AC072061.1-201ENST00000569710 2234 ntBASIC10.84□□□□□ -0.67
CKS2P33552 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 AR-208ENST00000612452 10676 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CKS2P33552 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 EMBP1-201ENST00000458200 901 ntBASIC10.84□□□□□ -0.67
CKS2P33552 IGHV3-22-201ENST00000520721 359 ntBASIC10.84□□□□□ -0.67
CKS2P33552 SLC25A39P2-201ENST00000537614 270 ntBASIC10.84□□□□□ -0.67
CKS2P33552 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC10.84□□□□□ -0.67
CKS2P33552 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.84□□□□□ -0.67
CKS2P33552 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC10.84□□□□□ -0.67
CKS2P33552 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
CKS2P33552 MIR6074-201ENST00000612054 107 ntBASIC10.84□□□□□ -0.67
CKS2P33552 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 MIR6069-201ENST00000620069 79 ntBASIC10.84□□□□□ -0.67
CKS2P33552 ZBTB7B-203ENST00000417934 4017 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 KRT8P12-202ENST00000472924 1397 ntBASIC10.84□□□□□ -0.67
CKS2P33552 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 HSPA8P5-201ENST00000456928 2069 ntBASIC10.84□□□□□ -0.67
CKS2P33552 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC10.84□□□□□ -0.67
CKS2P33552 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC10.84□□□□□ -0.67
CKS2P33552 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
CKS2P33552 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms