Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC172P0C7W6 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC172P0C7W6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC172P0C7W6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC172P0C7W6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CCDC172P0C7W6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 AC008494.3-201ENST00000606615 944 ntBASIC15.96■□□□□ 0.15
CCDC172P0C7W6 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 AL033527.5-201ENST00000641382 801 ntBASIC15.96■□□□□ 0.15
CCDC172P0C7W6 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC172P0C7W6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC172P0C7W6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC172P0C7W6 MBLAC2-202ENST00000514906 1936 ntBASIC15.96■□□□□ 0.14
CCDC172P0C7W6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CCDC172P0C7W6 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AC015688.4-201ENST00000580780 1647 ntBASIC15.95■□□□□ 0.14
CCDC172P0C7W6 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 GCOM2-201ENST00000509133 1104 ntBASIC15.95■□□□□ 0.14
CCDC172P0C7W6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AC138761.1-201ENST00000584393 385 ntBASIC15.95■□□□□ 0.14
CCDC172P0C7W6 CTBP2P3-201ENST00000585629 1255 ntBASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 AL096865.1-201ENST00000606796 927 ntBASIC15.95■□□□□ 0.14
CCDC172P0C7W6 WFDC1-204ENST00000613603 549 ntBASIC15.95■□□□□ 0.14
CCDC172P0C7W6 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.95■□□□□ 0.14
CCDC172P0C7W6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC172P0C7W6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC172P0C7W6 AC131902.2-201ENST00000566892 2172 ntBASIC15.94■□□□□ 0.14
CCDC172P0C7W6 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CCDC172P0C7W6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC172P0C7W6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CCDC172P0C7W6 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms