Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 HIST2H2BA-201ENST00000412169 381 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 MRPL22P1-201ENST00000505398 616 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AC124068.2-201ENST00000569473 1109 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AC025262.2-201ENST00000623975 1056 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AC005618.3-201ENST00000624928 458 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AL365209.1-201ENST00000624418 6473 ntBASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC187A0A096LP49 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCDC187A0A096LP49 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC187A0A096LP49 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.83□□□□□ -0.19
CCDC187A0A096LP49 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.83□□□□□ -0.19
CCDC187A0A096LP49 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCDC187A0A096LP49 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
CCDC187A0A096LP49 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC187A0A096LP49 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 LINC01101-201ENST00000622953 1884 ntBASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 KRT17P5-201ENST00000332088 839 ntBASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 AC138701.2-201ENST00000553634 226 ntBASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 MIR3180-2-201ENST00000581748 88 ntBASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 RN7SL470P-201ENST00000583069 259 ntBASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 AC084781.1-201ENST00000613737 656 ntBASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC187A0A096LP49 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC187A0A096LP49 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms