Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 KRT8P31-201ENST00000504812 1408 ntBASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 AC114947.1-202ENST00000514136 344 ntBASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 AC022532.1-201ENST00000624563 1728 ntBASIC16.14■□□□□ 0.17
UBE2OQ9C0C9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AC067930.6-201ENST00000623257 4947 ntBASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 LINC01815-202ENST00000641468 1409 ntBASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AC006122.1-201ENST00000493323 440 ntBASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AC006548.2-201ENST00000605217 529 ntBASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AC021016.3-201ENST00000608367 477 ntBASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AL627230.2-201ENST00000613254 655 ntBASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 AC144522.1-201ENST00000625111 1658 ntBASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
UBE2OQ9C0C9 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms