Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.82□□□□□ -0.68
Six5P70178 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Six5P70178 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.82□□□□□ -0.68
Six5P70178 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.82□□□□□ -0.68
Six5P70178 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.82□□□□□ -0.68
Six5P70178 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.82□□□□□ -0.68
Six5P70178 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Six5P70178 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Six5P70178 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.82□□□□□ -0.68
Six5P70178 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Six5P70178 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Six5P70178 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.81□□□□□ -0.68
Six5P70178 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Gm14071-201ENSMUST00000117817 509 ntBASIC10.81□□□□□ -0.68
Six5P70178 Gm8731-201ENSMUST00000118088 412 ntBASIC10.81□□□□□ -0.68
Six5P70178 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.81□□□□□ -0.68
Six5P70178 Gm3329-201ENSMUST00000159873 556 ntBASIC10.81□□□□□ -0.68
Six5P70178 Gm8459-201ENSMUST00000162504 760 ntBASIC10.81□□□□□ -0.68
Six5P70178 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.81□□□□□ -0.68
Six5P70178 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
Six5P70178 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC10.81□□□□□ -0.68
Six5P70178 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.81□□□□□ -0.68
Six5P70178 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.81□□□□□ -0.68
Six5P70178 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.81□□□□□ -0.68
Six5P70178 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Gm44755-201ENSMUST00000207830 2102 ntBASIC10.81□□□□□ -0.68
Six5P70178 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Six5P70178 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Six5P70178 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Six5P70178 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Six5P70178 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Six5P70178 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms