Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 FNTAP2-201ENST00000430308 634 ntBASIC15.49■□□□□ 0.07
RNF43Q68DV7 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 RN7SL713P-201ENST00000582127 302 ntBASIC15.49■□□□□ 0.07
RNF43Q68DV7 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AC073413.1-201ENST00000603927 732 ntBASIC15.49■□□□□ 0.07
RNF43Q68DV7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AP000593.2-201ENST00000542775 1433 ntBASIC15.49■□□□□ 0.07
RNF43Q68DV7 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF43Q68DV7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF43Q68DV7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 FAM8A4P-201ENST00000435433 1213 ntBASIC15.48■□□□□ 0.07
RNF43Q68DV7 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 AC091804.1-201ENST00000486888 567 ntBASIC15.48■□□□□ 0.07
RNF43Q68DV7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 FTLP10-202ENST00000505798 471 ntBASIC15.48■□□□□ 0.07
RNF43Q68DV7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 AC105129.2-201ENST00000559536 390 ntBASIC15.48■□□□□ 0.07
RNF43Q68DV7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 EEF1DP1-201ENST00000585891 896 ntBASIC15.48■□□□□ 0.07
RNF43Q68DV7 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
RNF43Q68DV7 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 AC152010.1-201ENST00000415779 2006 ntBASIC15.48■□□□□ 0.07
RNF43Q68DV7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 LILRP1-201ENST00000444199 1370 ntBASIC15.48■□□□□ 0.07
RNF43Q68DV7 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.48■□□□□ 0.07
RNF43Q68DV7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.47■□□□□ 0.07
RNF43Q68DV7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
RNF43Q68DV7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms