Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AC099336.1-201ENST00000417053 1171 ntBASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AL161932.2-201ENST00000435436 679 ntBASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AC119751.2-201ENST00000504529 210 ntBASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 HILS1-202ENST00000545329 423 ntBASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 AC064801.2-201ENST00000625052 1303 ntBASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 MST1P2-201ENST00000457982 2291 ntBASIC17.44■□□□□ 0.38
CREB3L3Q68CJ9 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 AC011474.4-201ENST00000623523 2076 ntBASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 CSF2RBP1-201ENST00000447905 391 ntBASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 AC132192.2-201ENST00000596206 1147 ntBASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CREB3L3Q68CJ9 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 TCAM1P-207ENST00000485295 1537 ntBASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 TMBIM7P-202ENST00000641474 1516 ntBASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 HLA-V-201ENST00000429037 534 ntBASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.42■□□□□ 0.38
CREB3L3Q68CJ9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms