Protein–RNA interactions for Protein: Q08170

SRSF4, Serine/arginine-rich splicing factor 4, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4Q08170 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SRSF4Q08170 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
SRSF4Q08170 MIR1908-201ENST00000410394 80 ntBASIC12.51□□□□□ -0.41
SRSF4Q08170 ACTBP11-201ENST00000436287 1126 ntBASIC12.51□□□□□ -0.41
SRSF4Q08170 HIST3H2BA-201ENST00000436555 524 ntBASIC12.51□□□□□ -0.41
SRSF4Q08170 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.51□□□□□ -0.41
SRSF4Q08170 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.51□□□□□ -0.41
SRSF4Q08170 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.51□□□□□ -0.41
SRSF4Q08170 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 SLC25A47P1-201ENST00000531577 414 ntBASIC12.51□□□□□ -0.41
SRSF4Q08170 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.51□□□□□ -0.41
SRSF4Q08170 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.51□□□□□ -0.41
SRSF4Q08170 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 RARRES2P5-201ENST00000564013 466 ntBASIC12.51□□□□□ -0.41
SRSF4Q08170 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.51□□□□□ -0.41
SRSF4Q08170 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.51□□□□□ -0.41
SRSF4Q08170 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
SRSF4Q08170 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.51□□□□□ -0.41
SRSF4Q08170 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
SRSF4Q08170 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
SRSF4Q08170 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 CICP16-201ENST00000502609 2813 ntBASIC12.51□□□□□ -0.41
SRSF4Q08170 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
SRSF4Q08170 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
SRSF4Q08170 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.51□□□□□ -0.41
SRSF4Q08170 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 Z82170.1-201ENST00000625081 3192 ntBASIC12.5□□□□□ -0.41
SRSF4Q08170 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
SRSF4Q08170 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 NME6-203ENST00000415644 849 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.5□□□□□ -0.41
SRSF4Q08170 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.5□□□□□ -0.41
SRSF4Q08170 PTK7-212ENST00000476760 902 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 AL583810.1-201ENST00000553344 1045 ntBASIC12.5□□□□□ -0.41
SRSF4Q08170 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.5□□□□□ -0.41
SRSF4Q08170 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC12.5□□□□□ -0.41
SRSF4Q08170 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 AC015936.2-201ENST00000593177 259 ntBASIC12.5□□□□□ -0.41
SRSF4Q08170 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SRSF4Q08170 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.5□□□□□ -0.41
SRSF4Q08170 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.5□□□□□ -0.41
SRSF4Q08170 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SRSF4Q08170 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms