Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MED17-227ENST00000640521 2047 ntTSL 5 BASIC25.73■■□□□ 1.71
PDLIM7Q9NR12 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PDLIM7Q9NR12 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PDLIM7Q9NR12 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 AC027682.1-201ENST00000562846 899 ntBASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 AC142381.3-201ENST00000568208 1670 ntBASIC25.71■■□□□ 1.71
PDLIM7Q9NR12 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC25.7■■□□□ 1.7
PDLIM7Q9NR12 AC090192.1-201ENST00000517740 490 ntBASIC25.7■■□□□ 1.7
PDLIM7Q9NR12 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.7■■□□□ 1.7
PDLIM7Q9NR12 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDLIM7Q9NR12 AC138932.3-201ENST00000567634 1902 ntBASIC25.7■■□□□ 1.7
PDLIM7Q9NR12 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDLIM7Q9NR12 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 SERBP1P1-201ENST00000396021 1160 ntBASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDLIM7Q9NR12 AP003733.4-201ENST00000623785 1697 ntBASIC25.68■■□□□ 1.7
PDLIM7Q9NR12 IRS3P-201ENST00000223076 1006 ntBASIC25.68■■□□□ 1.7
PDLIM7Q9NR12 AC092171.4-201ENST00000609130 632 ntBASIC25.68■■□□□ 1.7
PDLIM7Q9NR12 RARRES2P11-201ENST00000635158 484 ntBASIC25.68■■□□□ 1.7
PDLIM7Q9NR12 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDLIM7Q9NR12 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDLIM7Q9NR12 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.67■■□□□ 1.7
PDLIM7Q9NR12 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDLIM7Q9NR12 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDLIM7Q9NR12 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDLIM7Q9NR12 HLA-L-211ENST00000482052 1765 ntBASIC25.67■■□□□ 1.7
PDLIM7Q9NR12 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDLIM7Q9NR12 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDLIM7Q9NR12 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDLIM7Q9NR12 AC131274.2-201ENST00000580697 1507 ntBASIC25.66■■□□□ 1.7
PDLIM7Q9NR12 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDLIM7Q9NR12 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC25.66■■□□□ 1.7
PDLIM7Q9NR12 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC25.66■■□□□ 1.7
PDLIM7Q9NR12 AC005703.6-201ENST00000623265 1329 ntBASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 JTB-203ENST00000368589 1216 ntTSL 2 BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDLIM7Q9NR12 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.64■■□□□ 1.7
PDLIM7Q9NR12 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDLIM7Q9NR12 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.64■■□□□ 1.7
PDLIM7Q9NR12 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDLIM7Q9NR12 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PDLIM7Q9NR12 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 PTCHD3P2-201ENST00000424937 1205 ntBASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 AC008764.7-201ENST00000593779 1081 ntBASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDLIM7Q9NR12 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PDLIM7Q9NR12 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
PDLIM7Q9NR12 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms