Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRTAP4-4Q9BYR3 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRTAP4-4Q9BYR3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRTAP4-4Q9BYR3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRTAP4-4Q9BYR3 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRTAP4-4Q9BYR3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
KRTAP4-4Q9BYR3 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 CENPK-215ENST00000514814 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC4.65□□□□□ -1.66
KRTAP4-4Q9BYR3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 MIR639-201ENST00000384974 98 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 snosnR66.1-201ENST00000391095 99 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 ADAM10-203ENST00000402627 861 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AL133417.1-201ENST00000425290 688 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 ABHD17AP3-201ENST00000503096 1137 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC108475.1-201ENST00000507880 950 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AP005639.2-201ENST00000527592 928 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 B2M-202ENST00000544417 933 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC015818.2-201ENST00000563569 840 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC080013.4-201ENST00000607624 649 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 AC127502.1-201ENST00000399971 1502 ntBASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 ARL9-201ENST00000360096 1392 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
KRTAP4-4Q9BYR3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 ANKRD19P-201ENST00000338192 862 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 NPM1P31-201ENST00000399021 764 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AL050305.1-201ENST00000399993 1230 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 HES6-205ENST00000409356 528 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 FDX1P2-201ENST00000450769 375 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC009502.2-201ENST00000452903 766 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC018635.1-201ENST00000468292 1030 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC021146.8-201ENST00000507455 733 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 RN7SKP105-201ENST00000517192 314 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC144568.2-201ENST00000522481 944 ntTSL 5 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC134698.4-201ENST00000523451 826 ntBASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC4.64□□□□□ -1.67
KRTAP4-4Q9BYR3 MIR4449-201ENST00000578365 66 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms