Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCL13Q99616 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.07■□□□□ 0.64
CCL13Q99616 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.07■□□□□ 0.64
CCL13Q99616 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCL13Q99616 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.07■□□□□ 0.64
CCL13Q99616 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCL13Q99616 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC19.07■□□□□ 0.64
CCL13Q99616 ALDH1A3-203ENST00000557963 1670 ntBASIC19.07■□□□□ 0.64
CCL13Q99616 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCL13Q99616 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCL13Q99616 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCL13Q99616 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCL13Q99616 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCL13Q99616 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL13Q99616 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL13Q99616 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.06■□□□□ 0.64
CCL13Q99616 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL13Q99616 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL13Q99616 AL356441.2-201ENST00000443009 864 ntBASIC19.06■□□□□ 0.64
CCL13Q99616 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.06■□□□□ 0.64
CCL13Q99616 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCL13Q99616 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL13Q99616 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCL13Q99616 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL13Q99616 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL13Q99616 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL13Q99616 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL13Q99616 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL13Q99616 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL13Q99616 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL13Q99616 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL13Q99616 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL13Q99616 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCL13Q99616 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL13Q99616 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL13Q99616 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCL13Q99616 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL13Q99616 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL13Q99616 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL13Q99616 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL13Q99616 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL13Q99616 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL13Q99616 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL13Q99616 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.04■□□□□ 0.64
CCL13Q99616 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.04■□□□□ 0.64
CCL13Q99616 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL13Q99616 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL13Q99616 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
CCL13Q99616 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL13Q99616 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCL13Q99616 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL13Q99616 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL13Q99616 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
CCL13Q99616 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL13Q99616 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL13Q99616 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCL13Q99616 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.03■□□□□ 0.64
CCL13Q99616 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL13Q99616 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL13Q99616 AC005703.6-201ENST00000623265 1329 ntBASIC19.02■□□□□ 0.64
CCL13Q99616 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL13Q99616 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL13Q99616 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL13Q99616 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL13Q99616 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.02■□□□□ 0.64
CCL13Q99616 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.02■□□□□ 0.64
CCL13Q99616 MIR6724-1-201ENST00000616420 92 ntBASIC19.02■□□□□ 0.64
CCL13Q99616 MIR6724-2-201ENST00000616483 92 ntBASIC19.02■□□□□ 0.64
CCL13Q99616 MIR6724-4-201ENST00000617390 92 ntBASIC19.02■□□□□ 0.64
CCL13Q99616 MIR6724-3-201ENST00000622482 92 ntBASIC19.02■□□□□ 0.64
CCL13Q99616 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL13Q99616 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
CCL13Q99616 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCL13Q99616 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.01■□□□□ 0.63
CCL13Q99616 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL13Q99616 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCL13Q99616 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19■□□□□ 0.63
CCL13Q99616 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCL13Q99616 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19■□□□□ 0.63
CCL13Q99616 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19■□□□□ 0.63
CCL13Q99616 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19■□□□□ 0.63
CCL13Q99616 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL13Q99616 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL13Q99616 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCL13Q99616 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL13Q99616 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.99■□□□□ 0.63
CCL13Q99616 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.99■□□□□ 0.63
CCL13Q99616 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL13Q99616 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL13Q99616 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL13Q99616 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL13Q99616 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.99■□□□□ 0.63
CCL13Q99616 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms