Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 AC137761.2-201ENST00000561729 223 ntBASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 AC145350.3-201ENST00000569033 163 ntBASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNTNAP3BQ96NU0 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 AC005703.6-201ENST00000623265 1329 ntBASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 GPX1P1-201ENST00000388829 606 ntBASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 AC012414.1-201ENST00000556676 535 ntBASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNTNAP3BQ96NU0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.86■■□□□ 1.09
CNTNAP3BQ96NU0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CNTNAP3BQ96NU0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNTNAP3BQ96NU0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNTNAP3BQ96NU0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CNTNAP3BQ96NU0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.85■■□□□ 1.09
CNTNAP3BQ96NU0 LINC02228-203ENST00000641970 1355 ntBASIC21.85■■□□□ 1.09
CNTNAP3BQ96NU0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNTNAP3BQ96NU0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNTNAP3BQ96NU0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNTNAP3BQ96NU0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.84■■□□□ 1.09
CNTNAP3BQ96NU0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.84■■□□□ 1.09
CNTNAP3BQ96NU0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CNTNAP3BQ96NU0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.83■■□□□ 1.09
CNTNAP3BQ96NU0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
CNTNAP3BQ96NU0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CNTNAP3BQ96NU0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.83■■□□□ 1.09
CNTNAP3BQ96NU0 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.83■■□□□ 1.09
CNTNAP3BQ96NU0 AC142086.2-201ENST00000569753 217 ntBASIC21.83■■□□□ 1.09
CNTNAP3BQ96NU0 AL354811.1-201ENST00000610286 706 ntBASIC21.83■■□□□ 1.09
CNTNAP3BQ96NU0 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNTNAP3BQ96NU0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 BID-214ENST00000617586 542 ntTSL 5 BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNTNAP3BQ96NU0 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNTNAP3BQ96NU0 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 MIR663A-201ENST00000385250 93 ntBASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.79■■□□□ 1.08
CNTNAP3BQ96NU0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.78■■□□□ 1.08
CNTNAP3BQ96NU0 MIR572-201ENST00000384983 95 ntBASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms