Protein–RNA interactions for Protein: Q8R1C9

Apbb3, Amyloid-beta A4 precursor protein-binding family B member 3, mousemouse

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apbb3Q8R1C9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Apbb3Q8R1C9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Apbb3Q8R1C9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apbb3Q8R1C9 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Apbb3Q8R1C9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Gm43060-201ENSMUST00000200621 289 ntBASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Apbb3Q8R1C9 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Apbb3Q8R1C9 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apbb3Q8R1C9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apbb3Q8R1C9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apbb3Q8R1C9 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.21■□□□□ 0.83
Apbb3Q8R1C9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Apbb3Q8R1C9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Apbb3Q8R1C9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Apbb3Q8R1C9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Gm10493-201ENSMUST00000097270 612 ntBASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Apbb3Q8R1C9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Gm7291-201ENSMUST00000199147 382 ntBASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.19■□□□□ 0.82
Apbb3Q8R1C9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Apbb3Q8R1C9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apbb3Q8R1C9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apbb3Q8R1C9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.17■□□□□ 0.82
Apbb3Q8R1C9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Apbb3Q8R1C9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Apbb3Q8R1C9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Apbb3Q8R1C9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Apbb3Q8R1C9 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 Gm42569-201ENSMUST00000200539 472 ntBASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Apbb3Q8R1C9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Apbb3Q8R1C9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apbb3Q8R1C9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Apbb3Q8R1C9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.14■□□□□ 0.81
Apbb3Q8R1C9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Apbb3Q8R1C9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Apbb3Q8R1C9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Apbb3Q8R1C9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apbb3Q8R1C9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Apbb3Q8R1C9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms