Protein–RNA interactions for Protein: Q8CFE3

Rcor1, REST corepressor 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcor1Q8CFE3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rcor1Q8CFE3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.69■□□□□ 0.74
Rcor1Q8CFE3 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rcor1Q8CFE3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rcor1Q8CFE3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rcor1Q8CFE3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Gm43566-201ENSMUST00000196851 808 ntBASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rcor1Q8CFE3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
Rcor1Q8CFE3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.64■□□□□ 0.73
Rcor1Q8CFE3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rcor1Q8CFE3 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.64■□□□□ 0.73
Rcor1Q8CFE3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rcor1Q8CFE3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rcor1Q8CFE3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Rcor1Q8CFE3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rcor1Q8CFE3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rcor1Q8CFE3 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.62■□□□□ 0.73
Rcor1Q8CFE3 Gm13238-201ENSMUST00000117655 780 ntBASIC19.62■□□□□ 0.73
Rcor1Q8CFE3 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rcor1Q8CFE3 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.62■□□□□ 0.73
Rcor1Q8CFE3 Gm5921-201ENSMUST00000075898 882 ntBASIC19.62■□□□□ 0.73
Rcor1Q8CFE3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rcor1Q8CFE3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rcor1Q8CFE3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rcor1Q8CFE3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rcor1Q8CFE3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.6■□□□□ 0.73
Rcor1Q8CFE3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rcor1Q8CFE3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rcor1Q8CFE3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rcor1Q8CFE3 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.6■□□□□ 0.73
Rcor1Q8CFE3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 181 ms