Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx6Q8C7R7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx6Q8C7R7 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx6Q8C7R7 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx6Q8C7R7 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.74■□□□□ 0.91
Rfx6Q8C7R7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx6Q8C7R7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Rfx6Q8C7R7 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx6Q8C7R7 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx6Q8C7R7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx6Q8C7R7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx6Q8C7R7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx6Q8C7R7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx6Q8C7R7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx6Q8C7R7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx6Q8C7R7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx6Q8C7R7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx6Q8C7R7 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx6Q8C7R7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx6Q8C7R7 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.66■□□□□ 0.9
Rfx6Q8C7R7 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx6Q8C7R7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx6Q8C7R7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rfx6Q8C7R7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx6Q8C7R7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx6Q8C7R7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx6Q8C7R7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfx6Q8C7R7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms