Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 AL137060.1-201ENST00000618151 2648 ntBASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
KCNIP4Q6PIL6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 AC110285.7-201ENST00000624417 1536 ntBASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
KCNIP4Q6PIL6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNIP4Q6PIL6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNIP4Q6PIL6 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNIP4Q6PIL6 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
KCNIP4Q6PIL6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNIP4Q6PIL6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.58■□□□□ 0.41
KCNIP4Q6PIL6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 AL162393.1-201ENST00000437852 946 ntBASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
KCNIP4Q6PIL6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 AC087741.3-201ENST00000624270 1347 ntBASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.57■□□□□ 0.4
KCNIP4Q6PIL6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 MIR6090-201ENST00000622481 60 ntBASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC17.56■□□□□ 0.4
KCNIP4Q6PIL6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KCNIP4Q6PIL6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KCNIP4Q6PIL6 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP4Q6PIL6 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KCNIP4Q6PIL6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP4Q6PIL6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC17.54■□□□□ 0.4
KCNIP4Q6PIL6 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
KCNIP4Q6PIL6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KCNIP4Q6PIL6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
KCNIP4Q6PIL6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms