Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Gm27454-201ENSMUST00000185090 204 ntBASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav2Q5R1I9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav2Q5R1I9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav2Q5R1I9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav2Q5R1I9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.27■□□□□ 0.19
Trav2Q5R1I9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav2Q5R1I9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trav2Q5R1I9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Gm8770-201ENSMUST00000121113 1109 ntBASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav2Q5R1I9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav2Q5R1I9 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav2Q5R1I9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trav2Q5R1I9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav2Q5R1I9 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav2Q5R1I9 Gm37415-201ENSMUST00000192265 2054 ntBASIC16.22■□□□□ 0.19
Trav2Q5R1I9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.22■□□□□ 0.19
Trav2Q5R1I9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav2Q5R1I9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav2Q5R1I9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Gm45417-201ENSMUST00000209533 758 ntBASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav2Q5R1I9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.21■□□□□ 0.18
Trav2Q5R1I9 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav2Q5R1I9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
Trav2Q5R1I9 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav2Q5R1I9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms