Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Cln6Q3U466 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cln6Q3U466 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cln6Q3U466 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln6Q3U466 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cln6Q3U466 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cln6Q3U466 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.31■□□□□ 0.36
Cln6Q3U466 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.31■□□□□ 0.36
Cln6Q3U466 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cln6Q3U466 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln6Q3U466 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cln6Q3U466 Gm15043-201ENSMUST00000118843 1543 ntBASIC17.31■□□□□ 0.36
Cln6Q3U466 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Cln6Q3U466 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
Cln6Q3U466 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cln6Q3U466 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.3■□□□□ 0.36
Cln6Q3U466 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Cln6Q3U466 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.3■□□□□ 0.36
Cln6Q3U466 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cln6Q3U466 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.3■□□□□ 0.36
Cln6Q3U466 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln6Q3U466 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln6Q3U466 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln6Q3U466 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln6Q3U466 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cln6Q3U466 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cln6Q3U466 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.28■□□□□ 0.36
Cln6Q3U466 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.28■□□□□ 0.36
Cln6Q3U466 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cln6Q3U466 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln6Q3U466 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln6Q3U466 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cln6Q3U466 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Cln6Q3U466 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.27■□□□□ 0.35
Cln6Q3U466 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Cln6Q3U466 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Cln6Q3U466 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
Cln6Q3U466 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.26■□□□□ 0.35
Cln6Q3U466 Gm11175-201ENSMUST00000116172 543 ntBASIC17.26■□□□□ 0.35
Cln6Q3U466 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Cln6Q3U466 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cln6Q3U466 Iqck-206ENSMUST00000208658 2891 ntBASIC17.26■□□□□ 0.35
Cln6Q3U466 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
Cln6Q3U466 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Cln6Q3U466 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cln6Q3U466 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cln6Q3U466 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cln6Q3U466 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cln6Q3U466 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cln6Q3U466 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cln6Q3U466 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cln6Q3U466 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Cln6Q3U466 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cln6Q3U466 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cln6Q3U466 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cln6Q3U466 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Cln6Q3U466 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.24■□□□□ 0.35
Cln6Q3U466 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.24■□□□□ 0.35
Cln6Q3U466 Gm10420-201ENSMUST00000121713 882 ntBASIC17.24■□□□□ 0.35
Cln6Q3U466 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms