Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.09■□□□□ 0.016e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-203ENST00000557968 936 ntTSL 1 (best)15.06■□□□□ 06e-6■■■■□ 21.2
SRSF1Q07955 CSAD-220ENST00000548698 455 ntTSL 514.91□□□□□ -0.026e-6■■■■□ 21.2
SRSF1Q07955 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.066e-6■■■■□ 21.2
SRSF1Q07955 EGLN3-208ENST00000551935 575 ntTSL 414.55□□□□□ -0.081e-17■■■■□ 21.2
SRSF1Q07955 KLHL17-202ENST00000463212 955 ntTSL 1 (best)14.46□□□□□ -0.096e-6■■■■□ 21.2
SRSF1Q07955 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.14e-11■■■■□ 21.2
SRSF1Q07955 LINC01029-203ENST00000582805 788 ntTSL 1 (best)14.38□□□□□ -0.113e-7■■■■□ 21.2
SRSF1Q07955 INO80B-207ENST00000471577 818 ntTSL 214.36□□□□□ -0.116e-6■■■■□ 21.2
SRSF1Q07955 PIGG-219ENST00000511247 746 ntTSL 314.34□□□□□ -0.111e-6■■■■□ 21.2
SRSF1Q07955 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.136e-6■■■■□ 21.2
SRSF1Q07955 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.21□□□□□ -0.136e-6■■■■□ 21.2
SRSF1Q07955 ANKRD13D-205ENST00000504729 490 ntTSL 514.1□□□□□ -0.156e-6■■■■□ 21.2
SRSF1Q07955 ZNF473-207ENST00000598809 605 ntTSL 413.8□□□□□ -0.26e-6■■■■□ 21.2
SRSF1Q07955 INO80B-WBP1-201ENST00000441673 1668 ntAPPRIS ALT2 TSL 513.77□□□□□ -0.216e-6■■■■□ 21.2
SRSF1Q07955 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC13.73□□□□□ -0.216e-6■■■■□ 21.2
SRSF1Q07955 AKAP8L-219ENST00000601147 583 ntTSL 213.73□□□□□ -0.216e-6■■■■□ 21.2
SRSF1Q07955 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.71□□□□□ -0.216e-6■■■■□ 21.2
SRSF1Q07955 PRMT7-221ENST00000566687 384 ntTSL 313.7□□□□□ -0.226e-6■■■■□ 21.2
SRSF1Q07955 CSAD-207ENST00000437073 581 ntTSL 413.68□□□□□ -0.226e-6■■■■□ 21.2
SRSF1Q07955 CSAD-219ENST00000498635 585 ntTSL 413.67□□□□□ -0.226e-6■■■■□ 21.2
SRSF1Q07955 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.226e-6■■■■□ 21.2
SRSF1Q07955 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.246e-7■■■■□ 21.2
SRSF1Q07955 PRMT2-209ENST00000455177 581 ntTSL 313.56□□□□□ -0.246e-6■■■■□ 21.2
SRSF1Q07955 MAEA-217ENST00000512842 550 ntTSL 413.55□□□□□ -0.246e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-213ENST00000453855 1035 ntTSL 413.51□□□□□ -0.259e-7■■■■□ 21.2
SRSF1Q07955 AKAP8L-211ENST00000596213 929 ntTSL 313.5□□□□□ -0.256e-6■■■■□ 21.2
SRSF1Q07955 CSAD-206ENST00000424990 565 ntTSL 413.44□□□□□ -0.266e-6■■■■□ 21.2
SRSF1Q07955 MAEA-205ENST00000503653 845 ntTSL 313.31□□□□□ -0.286e-6■■■■□ 21.2
SRSF1Q07955 AKAP8L-205ENST00000595067 548 ntTSL 413.16□□□□□ -0.36e-6■■■■□ 21.2
SRSF1Q07955 PRMT2-212ENST00000482508 1478 ntTSL 1 (best)13.12□□□□□ -0.316e-6■■■■□ 21.2
SRSF1Q07955 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC12.94□□□□□ -0.346e-6■■■■□ 21.2
SRSF1Q07955 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.346e-6■■■■□ 21.2
SRSF1Q07955 CSAD-205ENST00000424845 558 ntTSL 312.87□□□□□ -0.356e-6■■■■□ 21.2
SRSF1Q07955 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.396e-6■■■■□ 21.2
SRSF1Q07955 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.396e-6■■■■□ 21.2
SRSF1Q07955 AKAP8L-218ENST00000600247 583 ntTSL 412.56□□□□□ -0.46e-6■■■■□ 21.2
SRSF1Q07955 PIGG-215ENST00000508562 570 ntTSL 412.45□□□□□ -0.423e-6■■■■□ 21.2
SRSF1Q07955 ZCCHC11-214ENST00000484723 2910 ntTSL 1 (best)12.4□□□□□ -0.422e-7■■■■□ 21.2
SRSF1Q07955 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.35□□□□□ -0.436e-7■■■■□ 21.2
SRSF1Q07955 CSAD-214ENST00000483632 558 ntTSL 412.3□□□□□ -0.446e-6■■■■□ 21.2
SRSF1Q07955 CSAD-213ENST00000475890 2080 ntTSL 512.25□□□□□ -0.456e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.456e-6■■■■□ 21.2
SRSF1Q07955 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.466e-6■■■■□ 21.2
SRSF1Q07955 ZNF473-204ENST00000594968 475 ntTSL 312.09□□□□□ -0.476e-6■■■■□ 21.2
SRSF1Q07955 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.05□□□□□ -0.486e-6■■■■□ 21.2
SRSF1Q07955 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.85□□□□□ -0.516e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-210ENST00000424405 758 ntTSL 511.78□□□□□ -0.521e-6■■■■□ 21.2
SRSF1Q07955 SPG7-206ENST00000562775 1595 ntTSL 1 (best)11.77□□□□□ -0.536e-8■■■■□ 21.2
SRSF1Q07955 RPS6KB1-205ENST00000472940 2808 ntTSL 211.65□□□□□ -0.546e-6■■■■□ 21.2
SRSF1Q07955 ZNF473-208ENST00000599155 558 ntTSL 411.6□□□□□ -0.556e-6■■■■□ 21.2
SRSF1Q07955 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.47□□□□□ -0.573e-6■■■■□ 21.2
SRSF1Q07955 PRMT2-211ENST00000481861 1301 ntTSL 1 (best)11.25□□□□□ -0.616e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-206ENST00000559164 678 ntTSL 511.23□□□□□ -0.616e-6■■■■□ 21.2
SRSF1Q07955 DTWD1-209ENST00000560632 552 ntTSL 311.23□□□□□ -0.616e-6■■■■□ 21.2
SRSF1Q07955 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.646e-7■■■■□ 21.2
SRSF1Q07955 DUS1L-210ENST00000578846 4456 ntTSL 211.02□□□□□ -0.654e-11■■■■□ 21.2
SRSF1Q07955 UQCC1-209ENST00000397556 1284 ntTSL 1 (best) BASIC11.02□□□□□ -0.659e-7■■■■□ 21.2
SRSF1Q07955 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC11.01□□□□□ -0.659e-7■■■■□ 21.2
SRSF1Q07955 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC10.98□□□□□ -0.656e-6■■■■□ 21.2
SRSF1Q07955 INO80B-202ENST00000409493 623 ntTSL 510.93□□□□□ -0.666e-6■■■■□ 21.2
SRSF1Q07955 CSAD-204ENST00000379850 2379 ntTSL 510.91□□□□□ -0.666e-6■■■■□ 21.2
SRSF1Q07955 AL049795.1-202ENST00000421616 786 ntTSL 3 BASIC10.89□□□□□ -0.676e-6■■■■□ 21.2
SRSF1Q07955 INO80B-208ENST00000473618 779 ntTSL 510.73□□□□□ -0.696e-6■■■■□ 21.2
SRSF1Q07955 INO80B-204ENST00000431187 559 ntTSL 210.73□□□□□ -0.696e-6■■■■□ 21.2
SRSF1Q07955 INO80B-209ENST00000494986 615 ntTSL 310.72□□□□□ -0.696e-6■■■■□ 21.2
SRSF1Q07955 AKAP8L-213ENST00000597994 470 ntTSL 410.67□□□□□ -0.76e-6■■■■□ 21.2
SRSF1Q07955 INO80B-205ENST00000455562 617 ntTSL 510.44□□□□□ -0.746e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-214ENST00000457259 1987 ntTSL 1 (best)10.33□□□□□ -0.769e-7■■■■□ 21.2
SRSF1Q07955 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC10.33□□□□□ -0.766e-7■■■■□ 21.2
SRSF1Q07955 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC10.17□□□□□ -0.786e-6■■■■□ 21.2
SRSF1Q07955 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.786e-6■■■■□ 21.2
SRSF1Q07955 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.14□□□□□ -0.796e-6■■■■□ 21.2
SRSF1Q07955 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC10.12□□□□□ -0.796e-6■■■■□ 21.2
SRSF1Q07955 PRMT7-223ENST00000567542 3542 ntTSL 1 (best)10.08□□□□□ -0.86e-7■■■■□ 21.2
SRSF1Q07955 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC10.04□□□□□ -0.86e-6■■■■□ 21.2
SRSF1Q07955 ZCCHC11-220ENST00000528642 3854 ntTSL 59.95□□□□□ -0.822e-7■■■■□ 21.2
SRSF1Q07955 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC9.94□□□□□ -0.823e-6■■■■□ 21.2
SRSF1Q07955 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC9.86□□□□□ -0.836e-6■■■■□ 21.2
SRSF1Q07955 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC9.81□□□□□ -0.846e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC9.77□□□□□ -0.859e-7■■■■□ 21.2
SRSF1Q07955 CYTH2-210ENST00000493260 4652 ntTSL 59.74□□□□□ -0.856e-7■■■■□ 21.2
SRSF1Q07955 UQCC1-206ENST00000374394 2329 ntTSL 29.71□□□□□ -0.869e-7■■■■□ 21.2
SRSF1Q07955 UQCC1-202ENST00000359226 2036 ntTSL 4 BASIC9.63□□□□□ -0.879e-7■■■■□ 21.2
SRSF1Q07955 PIGG-203ENST00000453061 3218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.893e-6■■■■□ 21.2
SRSF1Q07955 PIGG-201ENST00000310340 3203 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.93e-6■■■■□ 21.2
SRSF1Q07955 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC9.37□□□□□ -0.916e-6■■■■□ 21.2
SRSF1Q07955 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.916e-6■■■■□ 21.2
SRSF1Q07955 MSH6-204ENST00000445503 4158 ntTSL 1 (best)9.23□□□□□ -0.936e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-212ENST00000443429 692 ntTSL 59.18□□□□□ -0.941e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-218ENST00000491040 1017 ntTSL 1 (best)9.08□□□□□ -0.961e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-203ENST00000374380 2133 ntTSL 2 BASIC8.98□□□□□ -0.979e-7■■■■□ 21.2
SRSF1Q07955 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC8.82□□□□□ -16e-6■■■■□ 21.2
SRSF1Q07955 PFKFB3-205ENST00000379789 4157 ntTSL 1 (best) BASIC8.61□□□□□ -1.036e-6■■■■□ 21.2
SRSF1Q07955 ZNF473-201ENST00000270617 4688 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.036e-6■■■■□ 21.2
SRSF1Q07955 ZNF473-202ENST00000391821 4715 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.046e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-207ENST00000397553 566 ntTSL 58.17□□□□□ -1.16e-6■■■■□ 21.2
SRSF1Q07955 PFKFB3-218ENST00000639949 587 ntTSL 48.11□□□□□ -1.116e-6■■■■□ 21.2
SRSF1Q07955 UQCC1-205ENST00000374385 2447 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.139e-7■■■■□ 21.2
SRSF1Q07955 AKAP8L-210ENST00000596195 553 ntTSL 47.96□□□□□ -1.146e-6■■■■□ 21.2
Retrieved 100 of 14,836 protein–RNA pairs in 203.2 ms