Protein–RNA interactions for Protein: Q04781

RKR1, E3 ubiquitin-protein ligase listerin, yeastyeast

Predictions only

Length 1,562 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKR1Q04781 YIL001WYIL001W 1542 nt6.69□□□□□ -1.34
RKR1Q04781 TAF5YBR198C 2397 nt6.69□□□□□ -1.34
RKR1Q04781 SWC3YAL011W 1878 nt6.69□□□□□ -1.34
RKR1Q04781 EGT2YNL327W 3126 nt6.69□□□□□ -1.34
RKR1Q04781 IMD2YHR216W 1572 nt6.68□□□□□ -1.34
RKR1Q04781 SPC105YGL093W 2754 nt6.68□□□□□ -1.34
RKR1Q04781 STE7YDL159W 1548 nt6.68□□□□□ -1.34
RKR1Q04781 FLO8YER109C 2400 nt6.68□□□□□ -1.34
RKR1Q04781 HIS4YCL030C 2400 nt6.68□□□□□ -1.34
RKR1Q04781 AIP1YMR092C 1848 nt6.67□□□□□ -1.34
RKR1Q04781 TOS2YGR221C 1869 nt6.67□□□□□ -1.34
RKR1Q04781 CAF16YFL028C 870 nt6.67□□□□□ -1.34
RKR1Q04781 YGL072CYGL072C 360 nt6.67□□□□□ -1.34
RKR1Q04781 VPS68YOL129W 555 nt6.67□□□□□ -1.34
RKR1Q04781 RSC58YLR033W 1509 nt6.67□□□□□ -1.34
RKR1Q04781 SNU66YOR308C 1764 nt6.66□□□□□ -1.34
RKR1Q04781 OCA4YCR095C 1089 nt6.66□□□□□ -1.34
RKR1Q04781 MSK1YNL073W 1731 nt6.66□□□□□ -1.34
RKR1Q04781 AUA1YFL010W-A 285 nt6.65□□□□□ -1.34
RKR1Q04781 YLR407WYLR407W 687 nt6.65□□□□□ -1.34
RKR1Q04781 CWC25YNL245C 540 nt6.65□□□□□ -1.34
RKR1Q04781 OTU1YFL044C 906 nt6.65□□□□□ -1.35
RKR1Q04781 YGL214WYGL214W 486 nt6.65□□□□□ -1.35
RKR1Q04781 IGO2YHR132W-A 396 nt6.65□□□□□ -1.35
RKR1Q04781 FBP1YLR377C 1047 nt6.65□□□□□ -1.35
RKR1Q04781 CSR1YLR380W 1227 nt6.65□□□□□ -1.35
RKR1Q04781 YAL047W-AYAL047W-A 330 nt6.64□□□□□ -1.35
RKR1Q04781 DAL7YIR031C 1665 nt6.64□□□□□ -1.35
RKR1Q04781 RPS14AYCR031C 414 nt6.63□□□□□ -1.35
RKR1Q04781 YDR545C-AYDR545C-A 480 nt6.63□□□□□ -1.35
RKR1Q04781 YEL077W-AYEL077W-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YER187WYER187W 426 nt6.63□□□□□ -1.35
RKR1Q04781 YER190C-BYER190C-B 483 nt6.63□□□□□ -1.35
RKR1Q04781 YFL068WYFL068W 483 nt6.63□□□□□ -1.35
RKR1Q04781 tQ(UUG)CtQ(UUG)C 72 nt6.63□□□□□ -1.35
RKR1Q04781 tQ(UUG)D1tQ(UUG)D1 72 nt6.63□□□□□ -1.35
RKR1Q04781 tQ(UUG)D2tQ(UUG)D2 72 nt6.63□□□□□ -1.35
RKR1Q04781 tQ(UUG)D3tQ(UUG)D3 72 nt6.63□□□□□ -1.35
RKR1Q04781 tQ(UUG)E1tQ(UUG)E1 72 nt6.63□□□□□ -1.35
RKR1Q04781 tQ(UUG)HtQ(UUG)H 72 nt6.63□□□□□ -1.35
RKR1Q04781 tQ(UUG)LtQ(UUG)L 72 nt6.63□□□□□ -1.35
RKR1Q04781 YGR296C-BYGR296C-B 483 nt6.63□□□□□ -1.35
RKR1Q04781 YHL050W-AYHL050W-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YHR219C-AYHR219C-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YIL152WYIL152W 708 nt6.63□□□□□ -1.35
RKR1Q04781 YIL177W-AYIL177W-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 EFB1YAL003W 621 nt6.63□□□□□ -1.35
RKR1Q04781 YJL225W-AYJL225W-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 AIM26YKL037W 357 nt6.63□□□□□ -1.35
RKR1Q04781 YLL066W-AYLL066W-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YLL067W-AYLL067W-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YLR466C-AYLR466C-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YLR467C-AYLR467C-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YML133W-BYML133W-B 483 nt6.63□□□□□ -1.35
RKR1Q04781 YNL339W-BYNL339W-B 483 nt6.63□□□□□ -1.35
RKR1Q04781 YBL113W-AYBL113W-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YOR396C-AYOR396C-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YPL283W-BYPL283W-B 483 nt6.63□□□□□ -1.35
RKR1Q04781 YPR204C-AYPR204C-A 483 nt6.63□□□□□ -1.35
RKR1Q04781 YTA12YMR089C 2478 nt6.63□□□□□ -1.35
RKR1Q04781 YDR246W-AYDR246W-A 201 nt6.62□□□□□ -1.35
RKR1Q04781 PER33YLR064W 822 nt6.62□□□□□ -1.35
RKR1Q04781 RNR3YIL066C 2610 nt6.62□□□□□ -1.35
RKR1Q04781 CEX1YOR112W 2286 nt6.62□□□□□ -1.35
RKR1Q04781 FUR1YHR128W 651 nt6.61□□□□□ -1.35
RKR1Q04781 NAT2YGR147C 867 nt6.6□□□□□ -1.35
RKR1Q04781 LOH1YJL038C 660 nt6.59□□□□□ -1.35
RKR1Q04781 LDB19YOR322C 2457 nt6.59□□□□□ -1.35
RKR1Q04781 SEC39YLR440C 2130 nt6.59□□□□□ -1.36
RKR1Q04781 GDA1YEL042W 1557 nt6.59□□□□□ -1.36
RKR1Q04781 PXA1YPL147W 2613 nt6.59□□□□□ -1.36
RKR1Q04781 PGM2YMR105C 1710 nt6.58□□□□□ -1.36
RKR1Q04781 YDR090CYDR090C 933 nt6.58□□□□□ -1.36
RKR1Q04781 tC(GCA)BtC(GCA)B 72 nt6.58□□□□□ -1.36
RKR1Q04781 tC(GCA)GtC(GCA)G 72 nt6.58□□□□□ -1.36
RKR1Q04781 tC(GCA)P1tC(GCA)P1 72 nt6.58□□□□□ -1.36
RKR1Q04781 tC(GCA)P2tC(GCA)P2 72 nt6.58□□□□□ -1.36
RKR1Q04781 DPH1YIL103W 1278 nt6.57□□□□□ -1.36
RKR1Q04781 YML031C-AYML031C-A 336 nt6.57□□□□□ -1.36
RKR1Q04781 YML116W-AYML116W-A 303 nt6.57□□□□□ -1.36
RKR1Q04781 YJR038CYJR038C 363 nt6.57□□□□□ -1.36
RKR1Q04781 YER158CYER158C 1722 nt6.56□□□□□ -1.36
RKR1Q04781 HEL1YKR017C 1656 nt6.56□□□□□ -1.36
RKR1Q04781 YLR446WYLR446W 1302 nt6.56□□□□□ -1.36
RKR1Q04781 PDR15YDR406W 4590 nt6.56□□□□□ -1.36
RKR1Q04781 YJL193WYJL193W 1209 nt6.56□□□□□ -1.36
RKR1Q04781 KIN4YOR233W 2403 nt6.55□□□□□ -1.36
RKR1Q04781 ILV5YLR355C 1188 nt6.55□□□□□ -1.36
RKR1Q04781 RSC4YKR008W 1878 nt6.55□□□□□ -1.36
RKR1Q04781 NUP42YDR192C 1293 nt6.54□□□□□ -1.36
RKR1Q04781 YBR053CYBR053C 1077 nt6.54□□□□□ -1.36
RKR1Q04781 LTV1YKL143W 1392 nt6.54□□□□□ -1.36
RKR1Q04781 PAL1YDR348C 1500 nt6.54□□□□□ -1.36
RKR1Q04781 YBR284WYBR284W 2394 nt6.54□□□□□ -1.36
RKR1Q04781 UBX2YML013W 1755 nt6.54□□□□□ -1.36
RKR1Q04781 FLD1YLR404W 858 nt6.53□□□□□ -1.36
RKR1Q04781 VPS30YPL120W 1674 nt6.53□□□□□ -1.36
RKR1Q04781 BUD17YNR027W 954 nt6.52□□□□□ -1.36
RKR1Q04781 ATF1YOR377W 1578 nt6.52□□□□□ -1.37
RKR1Q04781 MET17YLR303W 1335 nt6.52□□□□□ -1.37
Retrieved 100 of 7,029 protein–RNA pairs in 12.2 ms