Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC26.38■■□□□ 1.81
ERCC3P19447 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
ERCC3P19447 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC26.38■■□□□ 1.81
ERCC3P19447 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ERCC3P19447 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
ERCC3P19447 AC092171.4-201ENST00000609130 632 ntBASIC26.38■■□□□ 1.81
ERCC3P19447 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ERCC3P19447 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ERCC3P19447 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC26.38■■□□□ 1.81
ERCC3P19447 MIR4767-201ENST00000582827 78 ntBASIC26.37■■□□□ 1.81
ERCC3P19447 MIR6089-201ENST00000616698 64 ntBASIC26.37■■□□□ 1.81
ERCC3P19447 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC26.37■■□□□ 1.81
ERCC3P19447 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
ERCC3P19447 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ERCC3P19447 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
ERCC3P19447 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC26.36■■□□□ 1.81
ERCC3P19447 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ERCC3P19447 SERBP1P1-201ENST00000396021 1160 ntBASIC26.36■■□□□ 1.81
ERCC3P19447 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ERCC3P19447 AC099791.2-201ENST00000605725 427 ntBASIC26.36■■□□□ 1.81
ERCC3P19447 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ERCC3P19447 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.35■■□□□ 1.81
ERCC3P19447 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.35■■□□□ 1.81
ERCC3P19447 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC26.35■■□□□ 1.81
ERCC3P19447 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ERCC3P19447 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ERCC3P19447 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ERCC3P19447 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.34■■□□□ 1.81
ERCC3P19447 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.34■■□□□ 1.81
ERCC3P19447 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.34■■□□□ 1.81
ERCC3P19447 PTMA-205ENST00000410064 814 ntTSL 2 BASIC26.34■■□□□ 1.81
ERCC3P19447 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.34■■□□□ 1.81
ERCC3P19447 AC092666.2-201ENST00000613287 246 ntBASIC26.34■■□□□ 1.81
ERCC3P19447 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ERCC3P19447 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ERCC3P19447 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
ERCC3P19447 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC26.33■■□□□ 1.81
ERCC3P19447 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC3P19447 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.33■■□□□ 1.81
ERCC3P19447 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.33■■□□□ 1.81
ERCC3P19447 AC009102.2-201ENST00000606772 1639 ntBASIC26.33■■□□□ 1.81
ERCC3P19447 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC3P19447 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.33■■□□□ 1.81
ERCC3P19447 AC091305.1-201ENST00000479476 895 ntBASIC26.33■■□□□ 1.81
ERCC3P19447 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC3P19447 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ERCC3P19447 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC26.32■■□□□ 1.8
ERCC3P19447 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC26.32■■□□□ 1.8
ERCC3P19447 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ERCC3P19447 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ERCC3P19447 AL022069.1-201ENST00000568025 1636 ntBASIC26.32■■□□□ 1.8
ERCC3P19447 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERCC3P19447 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ERCC3P19447 PTCHD3P2-201ENST00000424937 1205 ntBASIC26.31■■□□□ 1.8
ERCC3P19447 MAG-206ENST00000597035 542 ntTSL 4 BASIC26.31■■□□□ 1.8
ERCC3P19447 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC3P19447 RBM38-205ENST00000440234 686 ntTSL 2 BASIC26.3■■□□□ 1.8
ERCC3P19447 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC26.3■■□□□ 1.8
ERCC3P19447 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
ERCC3P19447 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.29■■□□□ 1.8
ERCC3P19447 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.29■■□□□ 1.8
ERCC3P19447 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
ERCC3P19447 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
ERCC3P19447 MIR5787-201ENST00000611784 55 ntBASIC26.29■■□□□ 1.8
ERCC3P19447 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.29■■□□□ 1.8
ERCC3P19447 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
ERCC3P19447 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERCC3P19447 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERCC3P19447 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERCC3P19447 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ERCC3P19447 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
ERCC3P19447 CA15P2-201ENST00000611168 834 ntBASIC26.27■■□□□ 1.8
ERCC3P19447 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ERCC3P19447 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
ERCC3P19447 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
ERCC3P19447 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERCC3P19447 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERCC3P19447 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
ERCC3P19447 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
ERCC3P19447 AC011298.3-201ENST00000615796 283 ntBASIC26.26■■□□□ 1.79
ERCC3P19447 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
ERCC3P19447 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERCC3P19447 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ERCC3P19447 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
ERCC3P19447 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ERCC3P19447 RASA4CP-201ENST00000424092 1398 ntBASIC26.25■■□□□ 1.79
ERCC3P19447 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC26.25■■□□□ 1.79
ERCC3P19447 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ERCC3P19447 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC26.25■■□□□ 1.79
ERCC3P19447 AL138724.1-201ENST00000606771 1088 ntBASIC26.25■■□□□ 1.79
ERCC3P19447 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.25■■□□□ 1.79
ERCC3P19447 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ERCC3P19447 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.25■■□□□ 1.79
ERCC3P19447 C17orf82-201ENST00000623772 1530 ntBASIC26.24■■□□□ 1.79
ERCC3P19447 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ERCC3P19447 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
ERCC3P19447 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.24■■□□□ 1.79
ERCC3P19447 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ERCC3P19447 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC26.24■■□□□ 1.79
ERCC3P19447 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms