Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.43■■□□□ 1.82
ALDH1A1P00352 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.82
ALDH1A1P00352 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
ALDH1A1P00352 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.42■■□□□ 1.82
ALDH1A1P00352 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.42■■□□□ 1.82
ALDH1A1P00352 KRT18P14-201ENST00000534205 1250 ntBASIC26.42■■□□□ 1.82
ALDH1A1P00352 pRNA.6-201ENST00000610482 90 ntBASIC26.42■■□□□ 1.82
ALDH1A1P00352 pRNA.5-201ENST00000612139 90 ntBASIC26.42■■□□□ 1.82
ALDH1A1P00352 pRNA.11-201ENST00000618423 90 ntBASIC26.42■■□□□ 1.82
ALDH1A1P00352 pRNA.13-201ENST00000619112 90 ntBASIC26.42■■□□□ 1.82
ALDH1A1P00352 MIR6084-201ENST00000622012 110 ntBASIC26.42■■□□□ 1.82
ALDH1A1P00352 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
ALDH1A1P00352 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ALDH1A1P00352 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.42■■□□□ 1.82
ALDH1A1P00352 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
ALDH1A1P00352 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
ALDH1A1P00352 AC096887.2-201ENST00000623443 1957 ntBASIC26.42■■□□□ 1.82
ALDH1A1P00352 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ALDH1A1P00352 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ALDH1A1P00352 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
ALDH1A1P00352 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ALDH1A1P00352 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.41■■□□□ 1.82
ALDH1A1P00352 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.41■■□□□ 1.82
ALDH1A1P00352 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ALDH1A1P00352 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ALDH1A1P00352 ME3-201ENST00000323418 1068 ntTSL 5 BASIC26.4■■□□□ 1.82
ALDH1A1P00352 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC26.4■■□□□ 1.82
ALDH1A1P00352 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC26.4■■□□□ 1.82
ALDH1A1P00352 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ALDH1A1P00352 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ALDH1A1P00352 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.4■■□□□ 1.82
ALDH1A1P00352 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC26.4■■□□□ 1.82
ALDH1A1P00352 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ALDH1A1P00352 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
ALDH1A1P00352 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.4■■□□□ 1.82
ALDH1A1P00352 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.4■■□□□ 1.82
ALDH1A1P00352 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ALDH1A1P00352 AL022069.1-201ENST00000568025 1636 ntBASIC26.39■■□□□ 1.82
ALDH1A1P00352 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ALDH1A1P00352 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
ALDH1A1P00352 LINC02228-203ENST00000641970 1355 ntBASIC26.39■■□□□ 1.82
ALDH1A1P00352 TK2-208ENST00000545043 1120 ntTSL 2 BASIC26.39■■□□□ 1.82
ALDH1A1P00352 TERF1P2-201ENST00000583350 1212 ntBASIC26.39■■□□□ 1.82
ALDH1A1P00352 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.39■■□□□ 1.82
ALDH1A1P00352 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.39■■□□□ 1.81
ALDH1A1P00352 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC26.39■■□□□ 1.81
ALDH1A1P00352 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ALDH1A1P00352 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ALDH1A1P00352 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.38■■□□□ 1.81
ALDH1A1P00352 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.38■■□□□ 1.81
ALDH1A1P00352 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ALDH1A1P00352 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
ALDH1A1P00352 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ALDH1A1P00352 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.37■■□□□ 1.81
ALDH1A1P00352 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ALDH1A1P00352 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
ALDH1A1P00352 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
ALDH1A1P00352 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.37■■□□□ 1.81
ALDH1A1P00352 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.37■■□□□ 1.81
ALDH1A1P00352 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
ALDH1A1P00352 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.37■■□□□ 1.81
ALDH1A1P00352 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
ALDH1A1P00352 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ALDH1A1P00352 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
ALDH1A1P00352 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ALDH1A1P00352 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.36■■□□□ 1.81
ALDH1A1P00352 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.36■■□□□ 1.81
ALDH1A1P00352 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
ALDH1A1P00352 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ALDH1A1P00352 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ALDH1A1P00352 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC26.35■■□□□ 1.81
ALDH1A1P00352 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.35■■□□□ 1.81
ALDH1A1P00352 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.35■■□□□ 1.81
ALDH1A1P00352 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.35■■□□□ 1.81
ALDH1A1P00352 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ALDH1A1P00352 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
ALDH1A1P00352 AC139426.1-201ENST00000568218 2529 ntBASIC26.34■■□□□ 1.81
ALDH1A1P00352 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC26.34■■□□□ 1.81
ALDH1A1P00352 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.34■■□□□ 1.81
ALDH1A1P00352 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
ALDH1A1P00352 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ALDH1A1P00352 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.34■■□□□ 1.81
ALDH1A1P00352 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.33■■□□□ 1.81
ALDH1A1P00352 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ALDH1A1P00352 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ALDH1A1P00352 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ALDH1A1P00352 AC080038.1-201ENST00000611274 1154 ntBASIC26.33■■□□□ 1.81
ALDH1A1P00352 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
ALDH1A1P00352 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.33■■□□□ 1.81
ALDH1A1P00352 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.33■■□□□ 1.8
ALDH1A1P00352 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ALDH1A1P00352 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ALDH1A1P00352 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
ALDH1A1P00352 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
ALDH1A1P00352 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
ALDH1A1P00352 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ALDH1A1P00352 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ALDH1A1P00352 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.32■■□□□ 1.8
ALDH1A1P00352 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
ALDH1A1P00352 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms