Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.46■■□□□ 1.51
CSPG5O95196 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC24.46■■□□□ 1.51
CSPG5O95196 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC24.46■■□□□ 1.51
CSPG5O95196 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CSPG5O95196 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
CSPG5O95196 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CSPG5O95196 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CSPG5O95196 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CSPG5O95196 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.45■■□□□ 1.5
CSPG5O95196 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CSPG5O95196 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CSPG5O95196 AC090192.1-201ENST00000517740 490 ntBASIC24.44■■□□□ 1.5
CSPG5O95196 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.44■■□□□ 1.5
CSPG5O95196 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CSPG5O95196 AC011298.3-201ENST00000615796 283 ntBASIC24.44■■□□□ 1.5
CSPG5O95196 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC24.44■■□□□ 1.5
CSPG5O95196 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CSPG5O95196 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CSPG5O95196 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CSPG5O95196 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC24.43■■□□□ 1.5
CSPG5O95196 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.43■■□□□ 1.5
CSPG5O95196 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CSPG5O95196 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.43■■□□□ 1.5
CSPG5O95196 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC24.43■■□□□ 1.5
CSPG5O95196 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
CSPG5O95196 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CSPG5O95196 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CSPG5O95196 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSPG5O95196 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CSPG5O95196 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
CSPG5O95196 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.42■■□□□ 1.5
CSPG5O95196 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC24.42■■□□□ 1.5
CSPG5O95196 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.42■■□□□ 1.5
CSPG5O95196 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSPG5O95196 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CSPG5O95196 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
CSPG5O95196 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.42■■□□□ 1.5
CSPG5O95196 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.41■■□□□ 1.5
CSPG5O95196 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
CSPG5O95196 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.41■■□□□ 1.5
CSPG5O95196 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSPG5O95196 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.41■■□□□ 1.5
CSPG5O95196 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CSPG5O95196 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.4■■□□□ 1.5
CSPG5O95196 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.4■■□□□ 1.5
CSPG5O95196 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSPG5O95196 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSPG5O95196 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CSPG5O95196 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.4■■□□□ 1.5
CSPG5O95196 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.4■■□□□ 1.5
CSPG5O95196 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CSPG5O95196 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.5
CSPG5O95196 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CSPG5O95196 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CSPG5O95196 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CSPG5O95196 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CSPG5O95196 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC24.39■■□□□ 1.5
CSPG5O95196 HACD1-201ENST00000326961 773 ntTSL 2 BASIC24.39■■□□□ 1.49
CSPG5O95196 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CSPG5O95196 STK32C-205ENST00000456004 607 ntTSL 2 BASIC24.39■■□□□ 1.49
CSPG5O95196 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.39■■□□□ 1.49
CSPG5O95196 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSPG5O95196 AC009086.3-201ENST00000623486 1008 ntBASIC24.39■■□□□ 1.49
CSPG5O95196 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CSPG5O95196 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSPG5O95196 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC24.38■■□□□ 1.49
CSPG5O95196 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSPG5O95196 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSPG5O95196 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CSPG5O95196 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC24.38■■□□□ 1.49
CSPG5O95196 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CSPG5O95196 AL031602.1-201ENST00000633169 911 ntBASIC24.38■■□□□ 1.49
CSPG5O95196 AC092803.2-201ENST00000564287 1899 ntBASIC24.38■■□□□ 1.49
CSPG5O95196 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.37■■□□□ 1.49
CSPG5O95196 C17orf82-201ENST00000623772 1530 ntBASIC24.37■■□□□ 1.49
CSPG5O95196 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSPG5O95196 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSPG5O95196 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CSPG5O95196 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.37■■□□□ 1.49
CSPG5O95196 AC136469.2-201ENST00000623944 1028 ntBASIC24.37■■□□□ 1.49
CSPG5O95196 RARRES2P11-201ENST00000635158 484 ntBASIC24.37■■□□□ 1.49
CSPG5O95196 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSPG5O95196 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC24.37■■□□□ 1.49
CSPG5O95196 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CSPG5O95196 SLC6A10P-202ENST00000431994 2058 ntBASIC24.36■■□□□ 1.49
CSPG5O95196 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.36■■□□□ 1.49
CSPG5O95196 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC24.36■■□□□ 1.49
CSPG5O95196 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.36■■□□□ 1.49
CSPG5O95196 AL138724.1-201ENST00000606771 1088 ntBASIC24.36■■□□□ 1.49
CSPG5O95196 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CSPG5O95196 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CSPG5O95196 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSPG5O95196 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.35■■□□□ 1.49
CSPG5O95196 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSPG5O95196 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.35■■□□□ 1.49
CSPG5O95196 AC233992.3-201ENST00000607491 485 ntBASIC24.35■■□□□ 1.49
CSPG5O95196 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.35■■□□□ 1.49
CSPG5O95196 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CSPG5O95196 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
CSPG5O95196 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms