Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 CCDC38-202ENST00000546386 2599 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 RPL17-C18orf32-201ENST00000332968 948 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 UBE2Q2P1-202ENST00000354771 883 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 NMS-201ENST00000376865 485 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 TPT1P9-201ENST00000413759 514 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AL355472.2-201ENST00000422958 438 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AL049792.1-201ENST00000424708 1262 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AL354794.2-201ENST00000424795 1248 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC008267.5-201ENST00000424928 265 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AL365400.1-201ENST00000431854 640 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC092170.1-201ENST00000440211 356 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 COX6CP12-201ENST00000446748 202 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 NEURL1-AS1-201ENST00000447820 439 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 MRPL35P2-201ENST00000448009 511 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 VN1R38P-201ENST00000450265 887 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC023115.1-201ENST00000450944 574 ntTSL 4 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 NCOR1P1-202ENST00000486162 291 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 EIF3LP3-201ENST00000495197 822 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC138646.1-201ENST00000519983 633 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 OR5AZ1P-201ENST00000527448 943 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PRPSAP2-217ENST00000542013 1047 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 DUX4L16-201ENST00000555130 1264 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC092757.2-201ENST00000559026 633 ntTSL 4 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 MIR548AI-201ENST00000579940 88 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 MIR3910-1-201ENST00000580936 111 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC243960.4-201ENST00000600532 288 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 MIR7844-201ENST00000616161 122 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AL136038.5-201ENST00000620835 554 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC009268.2-201ENST00000621925 457 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 OR4Q2-202ENST00000622436 921 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC066615.1-201ENST00000640911 628 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 AC087392.3-202ENST00000358446 1754 ntBASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
KRTAP3-3Q9BYR6 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 C1orf131-203ENST00000366651 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC008627.1-201ENST00000517511 1704 ntBASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC9.56□□□□□ -0.88
KRTAP3-3Q9BYR6 AC053503.6-201ENST00000623864 1843 ntBASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms