Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 KRT90P-201ENST00000549264 1064 ntBASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 RN7SL713P-201ENST00000582127 302 ntBASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 BTNL10-201ENST00000595971 695 ntBASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 PPT1-213ENST00000641319 2388 ntBASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC099521.3-201ENST00000624251 2938 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC098614.1-201ENST00000368528 745 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC010141.1-201ENST00000411585 623 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 CD8B2-202ENST00000417670 633 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AL355864.2-201ENST00000447420 863 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC233724.13-201ENST00000598383 410 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AL365181.3-201ENST00000605886 3222 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 AC005014.1-201ENST00000432006 2976 ntBASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RSPO3Q9BXY4 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 DGCR9-201ENST00000609630 2415 ntBASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.43□□□□□ -0.26
RSPO3Q9BXY4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms