Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AL023775.1-201ENST00000454907 1746 ntBASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC099336.1-201ENST00000417053 1171 ntBASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC022210.1-201ENST00000449856 793 ntBASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC119751.2-201ENST00000504529 210 ntBASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC027237.1-201ENST00000560942 655 ntBASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSPG4P5Q96PW8 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 HLA-V-201ENST00000429037 534 ntBASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 CSF2RBP1-201ENST00000447905 391 ntBASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 E2F3P2-201ENST00000447755 1422 ntBASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 CICP16-201ENST00000502609 2813 ntBASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.14■□□□□ 0.01
CSPG4P5Q96PW8 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC15.13■□□□□ 0.01
CSPG4P5Q96PW8 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms