Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
EFNA3P52797 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 CYP46A4P-201ENST00000414953 267 ntBASIC13.76□□□□□ -0.21
EFNA3P52797 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.76□□□□□ -0.21
EFNA3P52797 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.76□□□□□ -0.21
EFNA3P52797 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 AC005740.2-201ENST00000511085 419 ntBASIC13.76□□□□□ -0.21
EFNA3P52797 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.76□□□□□ -0.21
EFNA3P52797 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.76□□□□□ -0.21
EFNA3P52797 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.76□□□□□ -0.21
EFNA3P52797 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.76□□□□□ -0.21
EFNA3P52797 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 AC138649.2-201ENST00000615886 705 ntBASIC13.76□□□□□ -0.21
EFNA3P52797 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.76□□□□□ -0.21
EFNA3P52797 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
EFNA3P52797 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
EFNA3P52797 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
EFNA3P52797 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 SBF1P1-201ENST00000444527 5631 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
EFNA3P52797 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
EFNA3P52797 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
EFNA3P52797 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
EFNA3P52797 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA3P52797 EIF4HP1-201ENST00000453115 687 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 AC006122.1-201ENST00000493323 440 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 MARK2P5-201ENST00000507649 634 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.75□□□□□ -0.21
EFNA3P52797 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.75□□□□□ -0.21
EFNA3P52797 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.75□□□□□ -0.21
EFNA3P52797 RN7SL163P-201ENST00000583100 276 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC13.75□□□□□ -0.21
EFNA3P52797 AL606495.2-201ENST00000605867 535 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 AC026740.1-201ENST00000607068 791 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 AL021578.1-201ENST00000613646 709 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
EFNA3P52797 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.75□□□□□ -0.21
EFNA3P52797 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
EFNA3P52797 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
EFNA3P52797 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 AC144522.1-201ENST00000625111 1658 ntBASIC13.75□□□□□ -0.21
EFNA3P52797 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
EFNA3P52797 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
EFNA3P52797 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms