Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD48P09326 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.25■□□□□ 0.03
CD48P09326 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.25■□□□□ 0.03
CD48P09326 C2orf69P2-201ENST00000562032 1123 ntBASIC15.25■□□□□ 0.03
CD48P09326 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.25■□□□□ 0.03
CD48P09326 MIR6074-201ENST00000612054 107 ntBASIC15.25■□□□□ 0.03
CD48P09326 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.25■□□□□ 0.03
CD48P09326 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CD48P09326 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CD48P09326 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.24■□□□□ 0.03
CD48P09326 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.24■□□□□ 0.03
CD48P09326 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.24■□□□□ 0.03
CD48P09326 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.24■□□□□ 0.03
CD48P09326 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.24■□□□□ 0.03
CD48P09326 SORD2P-201ENST00000558556 1069 ntBASIC15.24■□□□□ 0.03
CD48P09326 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 AC011474.4-201ENST00000623523 2076 ntBASIC15.24■□□□□ 0.03
CD48P09326 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CD48P09326 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.24■□□□□ 0.03
CD48P09326 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.24■□□□□ 0.03
CD48P09326 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15.23■□□□□ 0.03
CD48P09326 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 AC026954.1-201ENST00000429771 1293 ntBASIC15.23■□□□□ 0.03
CD48P09326 KRT43P-201ENST00000434019 910 ntBASIC15.23■□□□□ 0.03
CD48P09326 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CD48P09326 CICP12-201ENST00000455801 843 ntBASIC15.23■□□□□ 0.03
CD48P09326 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.23■□□□□ 0.03
CD48P09326 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
CD48P09326 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms