Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 AP000344.2-201ENST00000512987 629 ntBASIC12.74□□□□□ -0.37
HLA-DQB1P01920 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HLA-DQB1P01920 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AL158070.2-201ENST00000623713 1621 ntBASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC106818.1-201ENST00000623223 3242 ntBASIC12.73□□□□□ -0.37
HLA-DQB1P01920 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 SERBP1P3-201ENST00000459980 809 ntBASIC12.73□□□□□ -0.37
HLA-DQB1P01920 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 MIR4453-201ENST00000584019 89 ntBASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC004835.2-201ENST00000603762 682 ntBASIC12.73□□□□□ -0.37
HLA-DQB1P01920 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AL589739.1-201ENST00000607720 493 ntBASIC12.73□□□□□ -0.37
HLA-DQB1P01920 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC009093.7-201ENST00000623853 1223 ntBASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HLA-DQB1P01920 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DQB1P01920 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms