Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CCDC78A2IDD5 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 CLUHP2-201ENST00000426660 1303 ntBASIC15.01□□□□□ -0.01
CCDC78A2IDD5 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 GK-202ENST00000378941 458 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 AP001889.1-201ENST00000525414 633 ntBASIC15.01□□□□□ -0.01
CCDC78A2IDD5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 AL596325.1-201ENST00000563991 1082 ntBASIC15.01□□□□□ -0.01
CCDC78A2IDD5 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 ECM1P1-201ENST00000604092 1279 ntBASIC15.01□□□□□ -0.01
CCDC78A2IDD5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CCDC78A2IDD5 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC78A2IDD5 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC15□□□□□ -0.01
CCDC78A2IDD5 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
CCDC78A2IDD5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15□□□□□ -0.01
CCDC78A2IDD5 TTTY23B-201ENST00000442790 549 ntBASIC15□□□□□ -0.01
CCDC78A2IDD5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15□□□□□ -0.01
CCDC78A2IDD5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15□□□□□ -0.01
CCDC78A2IDD5 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15□□□□□ -0.01
CCDC78A2IDD5 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCDC78A2IDD5 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CCDC78A2IDD5 AC015802.1-201ENST00000588104 1449 ntBASIC15□□□□□ -0.01
CCDC78A2IDD5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 AL138709.1-201ENST00000614840 1693 ntBASIC15□□□□□ -0.01
CCDC78A2IDD5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CCDC78A2IDD5 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCDC78A2IDD5 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 AGGF1P1-201ENST00000509500 2073 ntBASIC14.99□□□□□ -0.01
CCDC78A2IDD5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCDC78A2IDD5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms