Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 AC008825.2-201ENST00000603374 718 ntBASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 AC244157.2-201ENST00000616239 1006 ntBASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SCUBE3Q8IX30 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 AC007191.1-201ENST00000623179 2995 ntBASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 MYADML-201ENST00000474610 2147 ntBASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 AC010141.1-201ENST00000411585 623 ntBASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 CICP12-201ENST00000455801 843 ntBASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 AC022447.6-201ENST00000515522 438 ntBASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 AC027601.3-201ENST00000622907 509 ntBASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCUBE3Q8IX30 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.52■□□□□ 0.07
SCUBE3Q8IX30 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 E2F3P2-201ENST00000447755 1422 ntBASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 AL009178.2-201ENST00000597278 2719 ntBASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 ELK2AP-201ENST00000392510 1007 ntBASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 TPT1P11-201ENST00000458482 498 ntBASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 RPSAP36-202ENST00000494591 1261 ntBASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 TMEM14EP-202ENST00000639378 1296 ntBASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 AL034417.3-201ENST00000641100 1043 ntBASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.51■□□□□ 0.07
SCUBE3Q8IX30 AC015818.8-201ENST00000587907 1519 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms