Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 FAM86FP-201ENST00000338711 969 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AP000354.1-201ENST00000396982 456 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 POLR2LP1-206ENST00000444785 187 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AC131235.2-201ENST00000445553 1057 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AL132994.1-201ENST00000554098 400 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 NT5C-204ENST00000578337 582 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 TYMSP2-201ENST00000589501 424 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AC007952.5-201ENST00000572818 1486 ntBASIC14.03□□□□□ -0.16
RIF1Q5UIP0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
RIF1Q5UIP0 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SHMT1P1-201ENST00000419974 1312 ntBASIC14.02□□□□□ -0.16
RIF1Q5UIP0 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 ASS1P1-201ENST00000402854 1237 ntBASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SPTLC1P3-201ENST00000403408 259 ntBASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 AC093106.1-201ENST00000437271 352 ntBASIC14.02□□□□□ -0.16
RIF1Q5UIP0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 AC099328.1-201ENST00000498809 1030 ntBASIC14.02□□□□□ -0.16
RIF1Q5UIP0 AC095040.1-201ENST00000513286 675 ntBASIC14.02□□□□□ -0.16
RIF1Q5UIP0 IFNL3P1-201ENST00000595082 501 ntBASIC14.02□□□□□ -0.16
RIF1Q5UIP0 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
RIF1Q5UIP0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 AC069224.1-201ENST00000566372 1715 ntBASIC14.02□□□□□ -0.17
RIF1Q5UIP0 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 OLFML2B-202ENST00000367938 1153 ntTSL 2 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 NAT8B-201ENST00000377712 765 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 MIR611-201ENST00000384869 67 ntBASIC14.02□□□□□ -0.17
RIF1Q5UIP0 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 FAM86JP-202ENST00000484500 988 ntBASIC14.02□□□□□ -0.17
RIF1Q5UIP0 AC087203.1-201ENST00000532111 1181 ntBASIC14.02□□□□□ -0.17
RIF1Q5UIP0 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 NOC2LP2-201ENST00000407594 1944 ntBASIC14.02□□□□□ -0.17
RIF1Q5UIP0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RIF1Q5UIP0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RIF1Q5UIP0 RNU1-80P-201ENST00000459500 161 ntBASIC14.01□□□□□ -0.17
RIF1Q5UIP0 EEF1GP8-201ENST00000506566 1154 ntBASIC14.01□□□□□ -0.17
RIF1Q5UIP0 MYL6-215ENST00000549566 685 ntTSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms