Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HOXC5Q00444 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HOXC5Q00444 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC5Q00444 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC5Q00444 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 ACTBP8-201ENST00000403258 1108 ntBASIC13.71□□□□□ -0.21
HOXC5Q00444 PIN1P1-201ENST00000412108 996 ntBASIC13.71□□□□□ -0.21
HOXC5Q00444 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.71□□□□□ -0.21
HOXC5Q00444 AC007969.1-201ENST00000433675 447 ntBASIC13.71□□□□□ -0.21
HOXC5Q00444 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.71□□□□□ -0.21
HOXC5Q00444 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.71□□□□□ -0.21
HOXC5Q00444 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXC5Q00444 KRT18P25-201ENST00000508931 1278 ntBASIC13.71□□□□□ -0.21
HOXC5Q00444 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HOXC5Q00444 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.71□□□□□ -0.21
HOXC5Q00444 ENPP7P5-201ENST00000541031 1031 ntBASIC13.71□□□□□ -0.21
HOXC5Q00444 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.71□□□□□ -0.21
HOXC5Q00444 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.71□□□□□ -0.21
HOXC5Q00444 AC140912.1-201ENST00000577171 1054 ntBASIC13.71□□□□□ -0.21
HOXC5Q00444 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HOXC5Q00444 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC5Q00444 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC5Q00444 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 AL033527.5-201ENST00000641382 801 ntBASIC13.71□□□□□ -0.21
HOXC5Q00444 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC5Q00444 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
HOXC5Q00444 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
HOXC5Q00444 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
HOXC5Q00444 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
HOXC5Q00444 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.71□□□□□ -0.21
HOXC5Q00444 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HOXC5Q00444 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.71□□□□□ -0.22
HOXC5Q00444 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HOXC5Q00444 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
HOXC5Q00444 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.71□□□□□ -0.22
HOXC5Q00444 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.71□□□□□ -0.22
HOXC5Q00444 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.71□□□□□ -0.22
HOXC5Q00444 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
HOXC5Q00444 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
HOXC5Q00444 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.71□□□□□ -0.22
HOXC5Q00444 AL136172.1-201ENST00000598590 1394 ntBASIC13.71□□□□□ -0.22
HOXC5Q00444 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
HOXC5Q00444 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 AL122018.1-201ENST00000446607 2310 ntBASIC13.7□□□□□ -0.22
HOXC5Q00444 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HOXC5Q00444 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
HOXC5Q00444 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HOXC5Q00444 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HOXC5Q00444 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
HOXC5Q00444 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.7□□□□□ -0.22
HOXC5Q00444 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.7□□□□□ -0.22
HOXC5Q00444 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.7□□□□□ -0.22
HOXC5Q00444 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.7□□□□□ -0.22
HOXC5Q00444 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
HOXC5Q00444 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.7□□□□□ -0.22
HOXC5Q00444 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
HOXC5Q00444 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms