Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 BNIP3P29-201ENST00000598302 571 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 AC011447.5-201ENST00000616168 564 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 AL603764.1-201ENST00000636452 321 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 ST20-AS1-201ENST00000560255 4223 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 AC097359.2-201ENST00000604992 2389 ntBASIC13.59□□□□□ -0.23
CLDN20P56880 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.59□□□□□ -0.23
CLDN20P56880 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 AC011474.4-201ENST00000623523 2076 ntBASIC13.59□□□□□ -0.23
CLDN20P56880 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CLDN20P56880 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 AC006001.1-201ENST00000325130 474 ntBASIC13.59□□□□□ -0.23
CLDN20P56880 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CLDN20P56880 POM121L8P-201ENST00000417732 1281 ntBASIC13.59□□□□□ -0.23
CLDN20P56880 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN20P56880 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.59□□□□□ -0.23
CLDN20P56880 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 POM121L9P-203ENST00000441984 1285 ntBASIC13.59□□□□□ -0.23
CLDN20P56880 CSF2RBP1-201ENST00000447905 391 ntBASIC13.59□□□□□ -0.23
CLDN20P56880 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.59□□□□□ -0.23
CLDN20P56880 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC13.59□□□□□ -0.23
CLDN20P56880 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.59□□□□□ -0.23
CLDN20P56880 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN20P56880 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.59□□□□□ -0.23
CLDN20P56880 Six3os1_5.1-201ENST00000611000 271 ntBASIC13.59□□□□□ -0.23
CLDN20P56880 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
CLDN20P56880 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLDN20P56880 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CLDN20P56880 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CLDN20P56880 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.58□□□□□ -0.23
CLDN20P56880 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CLDN20P56880 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.58□□□□□ -0.23
CLDN20P56880 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
CLDN20P56880 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 AC152010.1-201ENST00000415779 2006 ntBASIC13.58□□□□□ -0.24
CLDN20P56880 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.58□□□□□ -0.24
CLDN20P56880 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CLDN20P56880 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.58□□□□□ -0.24
CLDN20P56880 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CLDN20P56880 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.58□□□□□ -0.24
CLDN20P56880 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN20P56880 MIR1202-201ENST00000408529 83 ntBASIC13.58□□□□□ -0.24
CLDN20P56880 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.58□□□□□ -0.24
CLDN20P56880 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLDN20P56880 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms