Protein–RNA interactions for Protein: P42772

CDKN2B, Cyclin-dependent kinase 4 inhibitor B, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2BP42772 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2BP42772 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2BP42772 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.21■□□□□ 0.03
CDKN2BP42772 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2BP42772 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 AL512384.1-201ENST00000406683 331 ntBASIC15.21■□□□□ 0.03
CDKN2BP42772 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CDKN2BP42772 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2BP42772 AC016694.1-201ENST00000434179 700 ntBASIC15.21■□□□□ 0.03
CDKN2BP42772 TTTY23B-201ENST00000442790 549 ntBASIC15.21■□□□□ 0.03
CDKN2BP42772 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKN2BP42772 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2BP42772 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2BP42772 AP005018.1-201ENST00000525475 301 ntBASIC15.21■□□□□ 0.03
CDKN2BP42772 AC078819.1-201ENST00000547454 765 ntBASIC15.21■□□□□ 0.03
CDKN2BP42772 AC012085.1-201ENST00000548270 765 ntBASIC15.21■□□□□ 0.03
CDKN2BP42772 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CDKN2BP42772 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 BTNL10-201ENST00000595971 695 ntBASIC15.21■□□□□ 0.03
CDKN2BP42772 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.21■□□□□ 0.03
CDKN2BP42772 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.21■□□□□ 0.03
CDKN2BP42772 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2BP42772 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2BP42772 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.21■□□□□ 0.03
CDKN2BP42772 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CDKN2BP42772 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.21■□□□□ 0.03
CDKN2BP42772 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CDKN2BP42772 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKN2BP42772 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDKN2BP42772 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.21■□□□□ 0.02
CDKN2BP42772 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.21■□□□□ 0.02
CDKN2BP42772 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDKN2BP42772 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CDKN2BP42772 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
CDKN2BP42772 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CDKN2BP42772 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC15.21■□□□□ 0.02
CDKN2BP42772 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKN2BP42772 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKN2BP42772 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CDKN2BP42772 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.21■□□□□ 0.02
CDKN2BP42772 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 AC064801.2-201ENST00000625052 1303 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CDKN2BP42772 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 KRT90P-201ENST00000549264 1064 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.2■□□□□ 0.02
CDKN2BP42772 AC027237.1-201ENST00000560942 655 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 RN7SL713P-201ENST00000582127 302 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 AL358472.3-201ENST00000608147 415 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 IGHV3-72-202ENST00000621503 303 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 AC138951.2-201ENST00000623455 1161 ntBASIC15.2■□□□□ 0.02
CDKN2BP42772 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.2■□□□□ 0.02
CDKN2BP42772 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CDKN2BP42772 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CDKN2BP42772 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.2■□□□□ 0.02
CDKN2BP42772 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms