Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.11□□□□□ -0.47
CEACAM3P40198 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.11□□□□□ -0.47
CEACAM3P40198 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CEACAM3P40198 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.1□□□□□ -0.47
CEACAM3P40198 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CEACAM3P40198 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.1□□□□□ -0.47
CEACAM3P40198 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 AC092135.3-201ENST00000624151 1846 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 AL355994.2-201ENST00000447882 704 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 KRT223P-202ENST00000449164 1292 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.1□□□□□ -0.47
CEACAM3P40198 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
CEACAM3P40198 AC106820.3-201ENST00000561653 397 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC12.1□□□□□ -0.47
CEACAM3P40198 RN7SL713P-201ENST00000582127 302 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 AC004466.1-201ENST00000599515 1080 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 AC005252.3-201ENST00000623855 2258 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 AC087386.2-201ENST00000623212 4637 ntBASIC12.1□□□□□ -0.47
CEACAM3P40198 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
CEACAM3P40198 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CEACAM3P40198 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CEACAM3P40198 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 AL136172.1-201ENST00000598590 1394 ntBASIC12.09□□□□□ -0.47
CEACAM3P40198 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC12.09□□□□□ -0.47
CEACAM3P40198 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 GK-202ENST00000378941 458 ntTSL 3 BASIC12.09□□□□□ -0.47
CEACAM3P40198 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CEACAM3P40198 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms