Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9XQ93008 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 RPL15-208ENST00000435882 1063 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 AC007881.1-201ENST00000437460 187 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 RN7SL578P-201ENST00000477781 283 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9XQ93008 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 KHSRPP1-201ENST00000427983 1768 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 MSANTD2P1-201ENST00000445341 1368 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 LINC01101-201ENST00000622953 1884 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9XQ93008 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9XQ93008 ZNF877P-201ENST00000437614 612 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 GOLGA6L16P-201ENST00000441780 1299 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 AL773545.2-201ENST00000442149 472 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 IGKV1OR2-108-201ENST00000453673 353 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
USP9XQ93008 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9XQ93008 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9XQ93008 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC12.59□□□□□ -0.39
USP9XQ93008 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC12.59□□□□□ -0.39
USP9XQ93008 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC12.59□□□□□ -0.39
USP9XQ93008 NF1P11-201ENST00000621292 1282 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 AL357143.1-203ENST00000639750 881 ntBASIC12.59□□□□□ -0.39
USP9XQ93008 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.59□□□□□ -0.39
USP9XQ93008 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
USP9XQ93008 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
USP9XQ93008 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
USP9XQ93008 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 SSR4P1-203ENST00000599569 2260 ntBASIC12.58□□□□□ -0.4
USP9XQ93008 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.58□□□□□ -0.4
USP9XQ93008 AC091304.3-201ENST00000566500 716 ntBASIC12.58□□□□□ -0.4
USP9XQ93008 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC12.58□□□□□ -0.4
USP9XQ93008 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 LILRP1-201ENST00000444199 1370 ntBASIC12.58□□□□□ -0.4
USP9XQ93008 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 HCG11-201ENST00000411553 5696 ntBASIC12.58□□□□□ -0.4
USP9XQ93008 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC12.58□□□□□ -0.4
USP9XQ93008 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
USP9XQ93008 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
USP9XQ93008 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC12.58□□□□□ -0.4
USP9XQ93008 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.58□□□□□ -0.4
USP9XQ93008 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC12.58□□□□□ -0.4
USP9XQ93008 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 LINC00265-2P-201ENST00000413372 782 ntBASIC12.58□□□□□ -0.4
USP9XQ93008 AC095040.1-201ENST00000513286 675 ntBASIC12.58□□□□□ -0.4
USP9XQ93008 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
USP9XQ93008 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms