Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 KRT18P36-201ENST00000411618 1276 ntBASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 FTLP1-201ENST00000449155 526 ntBASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AC007718.1-201ENST00000621078 280 ntBASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.25□□□□□ -0.29
RNFT1Q5M7Z0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 TBC1D3J-201ENST00000620719 1426 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 OR2K2-202ENST00000374428 1038 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 XBP1P1-201ENST00000436573 652 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 RPS2P36-201ENST00000456516 831 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 PFN2-206ENST00000461930 606 ntTSL 4 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 POU5F1P2-201ENST00000521750 823 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AL353726.2-201ENST00000623259 884 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 AC139712.1-201ENST00000378256 1875 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 LINC01165-201ENST00000445190 1623 ntBASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
RNFT1Q5M7Z0 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms