Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.42□□□□□ -0.42
CCL13Q99616 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.42□□□□□ -0.42
CCL13Q99616 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CCL13Q99616 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 MRPL37P1-201ENST00000592451 1337 ntBASIC12.41□□□□□ -0.42
CCL13Q99616 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CCL13Q99616 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
CCL13Q99616 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL13Q99616 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL13Q99616 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.41□□□□□ -0.42
CCL13Q99616 GCOM2-201ENST00000509133 1104 ntBASIC12.41□□□□□ -0.42
CCL13Q99616 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL13Q99616 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
CCL13Q99616 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 AC010328.2-201ENST00000597698 1111 ntBASIC12.41□□□□□ -0.42
CCL13Q99616 ZACNP1-201ENST00000612259 710 ntBASIC12.41□□□□□ -0.42
CCL13Q99616 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 LINC00552-201ENST00000625151 2579 ntBASIC12.41□□□□□ -0.42
CCL13Q99616 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC12.41□□□□□ -0.42
CCL13Q99616 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
CCL13Q99616 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.41□□□□□ -0.42
CCL13Q99616 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
CCL13Q99616 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CCL13Q99616 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL13Q99616 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms