Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC15.02■□□□□ -0
PHOX2BQ99453 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC15.02■□□□□ -0
PHOX2BQ99453 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.02■□□□□ -0
PHOX2BQ99453 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.02■□□□□ -0
PHOX2BQ99453 MIR6125-201ENST00000618986 96 ntBASIC15.02■□□□□ -0
PHOX2BQ99453 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PHOX2BQ99453 AL451007.2-201ENST00000632004 563 ntBASIC15.02■□□□□ -0
PHOX2BQ99453 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
PHOX2BQ99453 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC15.02■□□□□ -0
PHOX2BQ99453 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PHOX2BQ99453 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHOX2BQ99453 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHOX2BQ99453 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHOX2BQ99453 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHOX2BQ99453 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHOX2BQ99453 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PHOX2BQ99453 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PHOX2BQ99453 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
PHOX2BQ99453 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 AL583805.1-201ENST00000391389 531 ntBASIC15.01□□□□□ -0.01
PHOX2BQ99453 OLA1-206ENST00000428402 1270 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 AL645933.1-201ENST00000440087 609 ntBASIC15.01□□□□□ -0.01
PHOX2BQ99453 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 AC130324.1-201ENST00000584157 831 ntTSL 3 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 AC005041.3-201ENST00000606287 649 ntBASIC15.01□□□□□ -0.01
PHOX2BQ99453 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PHOX2BQ99453 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.01□□□□□ -0.01
PHOX2BQ99453 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 AC006058.4-201ENST00000624016 1670 ntBASIC15□□□□□ -0.01
PHOX2BQ99453 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC15□□□□□ -0.01
PHOX2BQ99453 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 LRRIQ3-202ENST00000370909 793 ntTSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 AL139094.1-201ENST00000405549 1188 ntBASIC15□□□□□ -0.01
PHOX2BQ99453 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 RPS6P14-201ENST00000425165 719 ntBASIC15□□□□□ -0.01
PHOX2BQ99453 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 AC245100.5-201ENST00000452108 331 ntBASIC15□□□□□ -0.01
PHOX2BQ99453 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15□□□□□ -0.01
PHOX2BQ99453 PGAM1P12-201ENST00000505622 748 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms