Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.73■□□□□ 0.11
RNF135Q8IUD6 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 TBC1D3J-201ENST00000620719 1426 ntBASIC15.72■□□□□ 0.11
RNF135Q8IUD6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 RN7SKP214-201ENST00000364208 315 ntBASIC15.72■□□□□ 0.11
RNF135Q8IUD6 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.72■□□□□ 0.11
RNF135Q8IUD6 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 AC103810.10-201ENST00000606504 343 ntBASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MIR6842-201ENST00000612539 65 ntBASIC15.72■□□□□ 0.11
RNF135Q8IUD6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RNF135Q8IUD6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AL359258.3-201ENST00000622910 2331 ntBASIC15.71■□□□□ 0.11
RNF135Q8IUD6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AL627231.1-201ENST00000394467 1125 ntBASIC15.71■□□□□ 0.11
RNF135Q8IUD6 GHSR-202ENST00000427970 912 ntBASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 MIR4754-201ENST00000582477 89 ntBASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AC005324.6-201ENST00000587972 613 ntBASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AC051619.9-201ENST00000623237 597 ntBASIC15.71■□□□□ 0.11
RNF135Q8IUD6 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.71■□□□□ 0.11
RNF135Q8IUD6 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms