Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13CQ709C8 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.93□□□□□ -0.5
VPS13CQ709C8 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13CQ709C8 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC11.93□□□□□ -0.5
VPS13CQ709C8 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13CQ709C8 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
VPS13CQ709C8 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13CQ709C8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13CQ709C8 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.93□□□□□ -0.5
VPS13CQ709C8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
VPS13CQ709C8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13CQ709C8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
VPS13CQ709C8 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
VPS13CQ709C8 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 MIR6125-201ENST00000618986 96 ntBASIC11.92□□□□□ -0.5
VPS13CQ709C8 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 RN7SL147P-201ENST00000487345 298 ntBASIC11.92□□□□□ -0.5
VPS13CQ709C8 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 AC007250.1-201ENST00000608934 338 ntBASIC11.92□□□□□ -0.5
VPS13CQ709C8 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 AL137077.2-201ENST00000635124 1608 ntBASIC11.92□□□□□ -0.5
VPS13CQ709C8 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 RN7SL582P-201ENST00000491078 279 ntBASIC11.92□□□□□ -0.5
VPS13CQ709C8 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 COX5A-205ENST00000568517 582 ntTSL 3 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
VPS13CQ709C8 Metazoa_SRP.157-201ENST00000622819 262 ntBASIC11.92□□□□□ -0.5
VPS13CQ709C8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
VPS13CQ709C8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 CDCA4P4-201ENST00000435216 680 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 AL451000.1-201ENST00000451300 1186 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 MIR4746-201ENST00000579802 71 ntBASIC11.91□□□□□ -0.5
VPS13CQ709C8 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
VPS13CQ709C8 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.91□□□□□ -0.5
VPS13CQ709C8 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms