Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.65■□□□□ 0.1
CHRNA3P32297 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 AC016397.2-201ENST00000624848 1985 ntBASIC15.65■□□□□ 0.1
CHRNA3P32297 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CHRNA3P32297 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CHRNA3P32297 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CHRNA3P32297 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.64■□□□□ 0.1
CHRNA3P32297 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 AL138799.1-201ENST00000448213 1675 ntBASIC15.64■□□□□ 0.09
CHRNA3P32297 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
CHRNA3P32297 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CHRNA3P32297 BAATP1-201ENST00000412284 1225 ntBASIC15.64■□□□□ 0.09
CHRNA3P32297 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA3P32297 AC234783.1-201ENST00000441761 496 ntBASIC15.64■□□□□ 0.09
CHRNA3P32297 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA3P32297 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CHRNA3P32297 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA3P32297 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.64■□□□□ 0.09
CHRNA3P32297 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.64■□□□□ 0.09
CHRNA3P32297 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 AL022328.1-201ENST00000610050 478 ntBASIC15.64■□□□□ 0.09
CHRNA3P32297 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.64■□□□□ 0.09
CHRNA3P32297 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.64■□□□□ 0.09
CHRNA3P32297 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CHRNA3P32297 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CHRNA3P32297 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CHRNA3P32297 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CHRNA3P32297 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CHRNA3P32297 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CHRNA3P32297 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.63■□□□□ 0.09
CHRNA3P32297 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.63■□□□□ 0.09
CHRNA3P32297 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.63■□□□□ 0.09
CHRNA3P32297 BCRP2-202ENST00000447763 634 ntBASIC15.63■□□□□ 0.09
CHRNA3P32297 CROCCP4-201ENST00000457096 498 ntBASIC15.63■□□□□ 0.09
CHRNA3P32297 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 BCRP6-201ENST00000510112 632 ntBASIC15.63■□□□□ 0.09
CHRNA3P32297 BCRP7-201ENST00000511549 544 ntBASIC15.63■□□□□ 0.09
CHRNA3P32297 AP001889.1-201ENST00000525414 633 ntBASIC15.63■□□□□ 0.09
CHRNA3P32297 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.63■□□□□ 0.09
CHRNA3P32297 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.63■□□□□ 0.09
CHRNA3P32297 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CHRNA3P32297 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms