Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC20.22■□□□□ 0.83
CPS1P31327 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CPS1P31327 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
CPS1P31327 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 LINC00528-201ENST00000600723 2160 ntBASIC20.22■□□□□ 0.83
CPS1P31327 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 GALP-202ENST00000440823 889 ntTSL 5 BASIC20.22■□□□□ 0.83
CPS1P31327 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC20.22■□□□□ 0.83
CPS1P31327 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC20.22■□□□□ 0.83
CPS1P31327 NDUFB10P1-201ENST00000567319 521 ntBASIC20.22■□□□□ 0.83
CPS1P31327 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPS1P31327 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC20.22■□□□□ 0.83
CPS1P31327 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.21■□□□□ 0.83
CPS1P31327 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC20.21■□□□□ 0.83
CPS1P31327 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.21■□□□□ 0.83
CPS1P31327 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPS1P31327 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
CPS1P31327 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 AL591122.2-201ENST00000624125 1853 ntBASIC20.21■□□□□ 0.83
CPS1P31327 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CPS1P31327 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC20.21■□□□□ 0.83
CPS1P31327 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC20.21■□□□□ 0.83
CPS1P31327 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC20.21■□□□□ 0.83
CPS1P31327 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC20.21■□□□□ 0.83
CPS1P31327 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC20.21■□□□□ 0.83
CPS1P31327 AC079414.2-201ENST00000567157 1104 ntBASIC20.21■□□□□ 0.83
CPS1P31327 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC20.21■□□□□ 0.83
CPS1P31327 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CPS1P31327 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC20.21■□□□□ 0.83
CPS1P31327 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CPS1P31327 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.21■□□□□ 0.83
CPS1P31327 AC138761.6-201ENST00000583997 1423 ntBASIC20.21■□□□□ 0.83
CPS1P31327 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CPS1P31327 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC20.2■□□□□ 0.82
CPS1P31327 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CPS1P31327 LCK-206ENST00000373564 2137 ntTSL 5 BASIC20.2■□□□□ 0.82
CPS1P31327 AC008894.3-201ENST00000624324 3103 ntBASIC20.2■□□□□ 0.82
CPS1P31327 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CPS1P31327 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CPS1P31327 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC20.2■□□□□ 0.82
CPS1P31327 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC20.2■□□□□ 0.82
CPS1P31327 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC20.2■□□□□ 0.82
CPS1P31327 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC20.2■□□□□ 0.82
CPS1P31327 CES1P2-201ENST00000566467 1242 ntBASIC20.2■□□□□ 0.82
CPS1P31327 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC20.2■□□□□ 0.82
CPS1P31327 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CPS1P31327 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC20.2■□□□□ 0.82
CPS1P31327 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CPS1P31327 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CPS1P31327 AC019109.1-201ENST00000401725 1874 ntBASIC20.19■□□□□ 0.82
CPS1P31327 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC20.19■□□□□ 0.82
CPS1P31327 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 PPT1-215ENST00000641471 2368 ntBASIC20.19■□□□□ 0.82
CPS1P31327 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CPS1P31327 LAP3P2-201ENST00000454686 1454 ntBASIC20.19■□□□□ 0.82
CPS1P31327 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CPS1P31327 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.19■□□□□ 0.82
CPS1P31327 AL137244.1-201ENST00000422931 865 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms