Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CHMP2AO43633 AK6-201ENST00000380818 1183 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 PTPA-218ENST00000435132 618 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 RNMTL1P1-201ENST00000454103 560 ntBASIC16.63■□□□□ 0.25
CHMP2AO43633 CICP12-201ENST00000455801 843 ntBASIC16.63■□□□□ 0.25
CHMP2AO43633 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 DUX4L46-201ENST00000566845 751 ntBASIC16.63■□□□□ 0.25
CHMP2AO43633 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.63■□□□□ 0.25
CHMP2AO43633 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 AL022328.3-201ENST00000607943 679 ntBASIC16.63■□□□□ 0.25
CHMP2AO43633 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC16.63■□□□□ 0.25
CHMP2AO43633 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 AL365209.1-201ENST00000624418 6473 ntBASIC16.63■□□□□ 0.25
CHMP2AO43633 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
CHMP2AO43633 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CHMP2AO43633 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CHMP2AO43633 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CHMP2AO43633 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CHMP2AO43633 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP2AO43633 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP2AO43633 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP2AO43633 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP2AO43633 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP2AO43633 POM121L10P-201ENST00000436994 1285 ntBASIC16.62■□□□□ 0.25
CHMP2AO43633 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.62■□□□□ 0.25
CHMP2AO43633 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP2AO43633 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.62■□□□□ 0.25
CHMP2AO43633 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 AC132192.2-201ENST00000596206 1147 ntBASIC16.62■□□□□ 0.25
CHMP2AO43633 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC16.62■□□□□ 0.25
CHMP2AO43633 BX088702.1-201ENST00000610784 235 ntBASIC16.62■□□□□ 0.25
CHMP2AO43633 AL162426.1-201ENST00000624141 743 ntBASIC16.62■□□□□ 0.25
CHMP2AO43633 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.62■□□□□ 0.25
CHMP2AO43633 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP2AO43633 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CHMP2AO43633 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.62■□□□□ 0.25
CHMP2AO43633 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 AC023824.1-201ENST00000562945 2975 ntBASIC16.62■□□□□ 0.25
CHMP2AO43633 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CHMP2AO43633 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP2AO43633 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CHMP2AO43633 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP2AO43633 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP2AO43633 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP2AO43633 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.61■□□□□ 0.25
CHMP2AO43633 AC006033.1-201ENST00000440505 426 ntBASIC16.61■□□□□ 0.25
CHMP2AO43633 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP2AO43633 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.61■□□□□ 0.25
CHMP2AO43633 ALG3P1-201ENST00000508806 1114 ntBASIC16.61■□□□□ 0.25
CHMP2AO43633 ZNF767P-206ENST00000513792 565 ntBASIC16.61■□□□□ 0.25
CHMP2AO43633 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP2AO43633 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP2AO43633 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CHMP2AO43633 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.61■□□□□ 0.25
CHMP2AO43633 AC006504.5-208ENST00000588784 2401 ntBASIC16.61■□□□□ 0.25
CHMP2AO43633 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms