Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AL035633.1-201ENST00000406139 838 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 TMEM14DP-201ENST00000422205 345 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AC131206.1-201ENST00000538078 1211 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AC015936.2-201ENST00000593177 259 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 BTNL10-201ENST00000595971 695 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AC138696.2-201ENST00000607376 223 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AL358472.5-202ENST00000641448 1267 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 INE2-201ENST00000630399 1874 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 HSPA7-201ENST00000445535 1927 ntBASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NHLRC1Q6VVB1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 AC097359.2-201ENST00000604992 2389 ntBASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 CR383656.12-201ENST00000549567 513 ntBASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 AC138466.3-201ENST00000619983 221 ntBASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.34□□□□□ -0.27
NHLRC1Q6VVB1 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms