Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Nudt13-207ENSMUST00000224311 1574 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Arpp21-217ENSMUST00000161412 1687 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm12692-201ENSMUST00000121092 546 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm5398-201ENSMUST00000121933 984 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm31466-201ENSMUST00000195457 916 ntTSL 3 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Olfr696-ps1-201ENSMUST00000207160 948 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm19090-201ENSMUST00000218187 774 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 AC140393.4-201ENSMUST00000226994 765 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 AC137842.1-201ENSMUST00000227896 2064 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 AC124561.1-202ENSMUST00000228652 1929 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm45546-201ENSMUST00000211053 2394 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm32255-201ENSMUST00000219456 1349 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm43165-201ENSMUST00000200842 1635 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm5535-201ENSMUST00000099292 1743 ntTSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm13542-201ENSMUST00000118484 637 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm16077-201ENSMUST00000121915 655 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm13631-201ENSMUST00000140978 654 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm17828-201ENSMUST00000183380 799 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm34106-201ENSMUST00000193782 503 ntTSL 3 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Mbnl2-204ENSMUST00000227012 2390 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm15535-202ENSMUST00000148478 1519 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Etfbkmt-202ENSMUST00000111547 1250 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm14010-201ENSMUST00000131961 374 ntTSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Ptma-202ENSMUST00000186255 768 ntTSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm5459-201ENSMUST00000171235 798 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm8918-201ENSMUST00000190587 1087 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm2981-201ENSMUST00000213947 694 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm46344-201ENSMUST00000220530 887 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 AC134793.1-202ENSMUST00000227444 803 ntBASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ush2AQ2QI47 Gm14005-209ENSMUST00000224993 1832 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm14278-201ENSMUST00000117381 878 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm8091-201ENSMUST00000150506 886 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm8388-201ENSMUST00000193000 756 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm7047-201ENSMUST00000196224 1063 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Wfdc12-201ENSMUST00000051272 775 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Gm42748-201ENSMUST00000199354 2341 ntBASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ush2AQ2QI47 Prpf38a-201ENSMUST00000079213 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms