Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
GABREP78334 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.04□□□□□ -0.16
GABREP78334 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC14.04□□□□□ -0.16
GABREP78334 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 CICP12-201ENST00000455801 843 ntBASIC14.04□□□□□ -0.16
GABREP78334 AP000358.1-201ENST00000456260 156 ntBASIC14.04□□□□□ -0.16
GABREP78334 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.04□□□□□ -0.16
GABREP78334 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.04□□□□□ -0.16
GABREP78334 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC14.04□□□□□ -0.16
GABREP78334 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.04□□□□□ -0.16
GABREP78334 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.04□□□□□ -0.16
GABREP78334 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GABREP78334 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
GABREP78334 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GABREP78334 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.03□□□□□ -0.16
GABREP78334 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.03□□□□□ -0.16
GABREP78334 SSR4P1-203ENST00000599569 2260 ntBASIC14.03□□□□□ -0.16
GABREP78334 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.03□□□□□ -0.16
GABREP78334 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.03□□□□□ -0.16
GABREP78334 AC097065.1-201ENST00000425737 517 ntBASIC14.03□□□□□ -0.16
GABREP78334 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC14.03□□□□□ -0.16
GABREP78334 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC14.03□□□□□ -0.16
GABREP78334 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.03□□□□□ -0.16
GABREP78334 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GABREP78334 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
GABREP78334 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.03□□□□□ -0.16
GABREP78334 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
GABREP78334 AC144522.1-201ENST00000625111 1658 ntBASIC14.03□□□□□ -0.16
GABREP78334 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 AC087481.3-201ENST00000602886 1894 ntBASIC14.03□□□□□ -0.16
GABREP78334 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
GABREP78334 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
GABREP78334 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.02□□□□□ -0.16
GABREP78334 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
GABREP78334 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
GABREP78334 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.02□□□□□ -0.16
GABREP78334 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
GABREP78334 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.02□□□□□ -0.16
GABREP78334 AC015909.3-201ENST00000572855 1794 ntBASIC14.02□□□□□ -0.16
GABREP78334 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.02□□□□□ -0.16
GABREP78334 TMBIM7P-203ENST00000641617 1718 ntBASIC14.02□□□□□ -0.16
GABREP78334 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
GABREP78334 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14.02□□□□□ -0.16
GABREP78334 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms