Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC12.94□□□□□ -0.34
FOXG1P55316 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 AL161772.1-201ENST00000610494 4412 ntBASIC12.94□□□□□ -0.34
FOXG1P55316 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC12.94□□□□□ -0.34
FOXG1P55316 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.94□□□□□ -0.34
FOXG1P55316 AC099548.2-209ENST00000480264 625 ntBASIC12.94□□□□□ -0.34
FOXG1P55316 AC021723.1-201ENST00000486306 515 ntBASIC12.94□□□□□ -0.34
FOXG1P55316 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.94□□□□□ -0.34
FOXG1P55316 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.94□□□□□ -0.34
FOXG1P55316 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 AC008825.2-201ENST00000603374 718 ntBASIC12.94□□□□□ -0.34
FOXG1P55316 AL451050.2-201ENST00000606967 682 ntBASIC12.94□□□□□ -0.34
FOXG1P55316 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
FOXG1P55316 PCBP2-OT1-201ENST00000634357 590 ntBASIC12.94□□□□□ -0.34
FOXG1P55316 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.94□□□□□ -0.34
FOXG1P55316 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
FOXG1P55316 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC12.94□□□□□ -0.34
FOXG1P55316 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.94□□□□□ -0.34
FOXG1P55316 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FOXG1P55316 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC12.93□□□□□ -0.34
FOXG1P55316 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 NKAIN1P1-201ENST00000435754 582 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 AC006033.1-201ENST00000440505 426 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC12.93□□□□□ -0.34
FOXG1P55316 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.93□□□□□ -0.34
FOXG1P55316 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 AC044849.1-201ENST00000519737 1188 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC12.93□□□□□ -0.34
FOXG1P55316 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.93□□□□□ -0.34
FOXG1P55316 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC12.93□□□□□ -0.34
FOXG1P55316 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 AC005962.1-201ENST00000584100 773 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.93□□□□□ -0.34
FOXG1P55316 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.93□□□□□ -0.34
FOXG1P55316 AL022328.3-201ENST00000607943 679 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 Z98259.2-201ENST00000641583 609 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 FLJ16779-201ENST00000612722 7638 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 AGGF1P1-201ENST00000509500 2073 ntBASIC12.93□□□□□ -0.34
FOXG1P55316 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC12.93□□□□□ -0.34
FOXG1P55316 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
FOXG1P55316 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
FOXG1P55316 KRT8P29-201ENST00000420409 1371 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms